RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 OR5T3Q8NGG3 340 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 OR6Q1Q8NGQ2 317 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 SLC37A2Q8TED4 501 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 NMNAT1Q9HAN9 279 aaPredicted RBP11.69□□□□□ -0.54
RNF4-201ENST00000314289 A4GALTQ9NPC4 353 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 ACSS1Q9NUB1 689 aaPredicted RBP11.69□□□□□ -0.54
RNF4-201ENST00000314289 HRASLS2Q9NWW9 162 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 ACTR10Q9NZ32 417 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 ANKMY1Q9P2S6 941 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 CPNE7Q9UBL6 633 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 SEC16AO15027 2179 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 THEGLP0DJG4 465 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 HOXB6P17509 224 aaKnown RBP11.69□□□□□ -0.54
RNF4-201ENST00000314289 FUT5Q11128 374 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 TOP3AQ13472 1001 aaPredicted RBP11.69□□□□□ -0.54
RNF4-201ENST00000314289 KEAP1Q14145 624 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 FCRL6Q6DN72 434 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 MRM1Q6IN84 353 aaKnown RBP11.69□□□□□ -0.54
RNF4-201ENST00000314289 SLC48A1Q6P1K1 146 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 FIGLAQ6QHK4 219 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 CLIP4Q8N3C7 705 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 ARSGQ96EG1 525 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 VMP1Q96GC9 406 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 SEMA3GQ9NS98 782 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 PCDHGA2Q9Y5H1 932 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 ASXL3Q9C0F0 2248 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 A6NL46 340 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 B4DGG1 531 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 LDB3O75112 727 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 ITGA2P17301 1181 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 CD40LGP29965 261 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 NR4A2P43354 598 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 MASP1P48740 699 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 STXBP1P61764 594 aaKnown RBP11.68□□□□□ -0.54
RNF4-201ENST00000314289 MINDY2Q8NBR6 621 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 FAM46DQ8NEK8 389 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 OR2A5Q96R48 311 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 CAPN10Q9HC96 672 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 THSD1Q9NS62 852 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 P2RX2Q9UBL9 471 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 CES1P1Q9UKY3 287 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 PCDHGA10Q9Y5H3 936 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 SPAG17Q6Q759 2223 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 TBX1O43435 398 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 DNAJB5O75953 348 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 CCNB2O95067 398 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 SLC35G6P0C7Q6 338 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 SLC35A2P78381 396 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 RUNX2Q13950 521 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 P3H2Q8IVL5 708 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 DENND6BQ8NEG7 585 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 SLC6A18Q96N87 628 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 RBCK1Q9BYM8 510 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 ZNF556Q9HAH1 456 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 TAS2R7Q9NYW3 318 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.68□□□□□ -0.54
RNF4-201ENST00000314289 WDFY3Q8IZQ1 3526 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 OR10H3O60404 316 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 LCKP06239 509 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 CSNK2A2P19784 350 aaPredicted RBP11.68□□□□□ -0.54
RNF4-201ENST00000314289 CPN2P22792 545 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 EIF2B5Q13144 721 aaKnown RBP11.68□□□□□ -0.54
RNF4-201ENST00000314289 IL18R1Q13478 541 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 GAS6Q14393 721 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 COLEC12Q5KU26 742 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 ATAD3BQ5T9A4 648 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 FAM111BQ6SJ93 734 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 POC5Q8NA72 575 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 APOBEC4Q8WW27 367 aaKnown RBP11.68□□□□□ -0.54
RNF4-201ENST00000314289 RSC1A1Q92681 617 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 HRASLS5Q96KN8 279 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 C11orf16Q9NQ32 467 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 SCN3BQ9NY72 215 aa11.68□□□□□ -0.54
RNF4-201ENST00000314289 WBP11Q9Y2W2 641 aaKnown RBP11.68□□□□□ -0.54
RNF4-201ENST00000314289 FCMRO60667 390 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 TBX19O60806 448 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 TNFP01375 233 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 CCDC159P0C7I6 412 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 NR2F6P10588 404 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 CTSEP14091 401 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 RHCEP18577 417 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 NDUFS1P28331 727 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 RGS1Q08116 209 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 AKAP14Q86UN6 197 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 NUP43Q8NFH3 380 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 DYNC2LI1Q8TCX1 351 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 FBLIM1Q8WUP2 373 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 PHOX2BQ99453 314 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 DSN1Q9H410 356 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 GPR83Q9NYM4 423 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 TAS2R16Q9NYV7 291 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 HCN4Q9Y3Q4 1203 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 ZNF780BQ9Y6R6 833 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 OR2A25A4D2G3 310 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 CLDN24A6NM45 220 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 H0YGG7 62 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 EPPINO95925 133 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 MPIP34949 423 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 KCNJ5P48544 419 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 ST13P50502 369 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms