RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 ANGPT1Q15389 498 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 OR2G6Q5TZ20 316 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 PRAMEF8Q5VWM4 474 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 PRAMEF7Q5VXH5 474 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 KLHL36Q8N4N3 616 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 ANKK1Q8NFD2 765 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 SUN3Q8TAQ9 357 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 SMG7Q92540 1137 aaKnown RBP13.06□□□□□ -0.32
MKS1-201ENST00000313863 EXOSC8Q96B26 276 aaKnown RBP13.06□□□□□ -0.32
MKS1-201ENST00000313863 COQ10AQ96MF6 247 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 MARVELD1Q9BSK0 173 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 PINK1Q9BXM7 581 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 IRF2BPLQ9H1B7 796 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 ASB6Q9NWX5 421 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 TRPC4Q9UBN4 977 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 CKAP5Q14008 2032 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 LRRK1Q38SD2 2015 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 M0R3H8 397 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 CPNE3O75131 537 aaKnown RBP13.06□□□□□ -0.32
MKS1-201ENST00000313863 DRD2P14416 443 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 HTR2BP41595 481 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 VASPP50552 380 aaPredicted RBP13.06□□□□□ -0.32
MKS1-201ENST00000313863 CCR8P51685 355 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 RRAS2P62070 204 aaPredicted RBP13.06□□□□□ -0.32
MKS1-201ENST00000313863 HOXC5Q00444 222 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 SYPL1Q16563 259 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 CCDC58Q4VC31 144 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 FLYWCH1Q4VC44 716 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 PRICKLE2Q7Z3G6 844 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 KIAA0907Q7Z7F0 614 aaPredicted RBP13.06□□□□□ -0.32
MKS1-201ENST00000313863 DCUN1D3Q8IWE4 304 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 OR2L2Q8NH16 312 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 RAET1EQ8TD07 263 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 PXYLP1Q8TE99 480 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 XAGE5Q8WWM1 108 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 AUTS2Q8WXX7 1259 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 SLC9A6Q92581 669 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 CREB3L1Q96BA8 519 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 SCLYQ96I15 445 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 F2RL3Q96RI0 385 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 TM9SF2Q99805 663 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 ATF6BQ99941 703 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 BEX2Q9BXY8 128 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 ZNF717Q9BY31 904 aaPredicted RBP13.06□□□□□ -0.32
MKS1-201ENST00000313863 SAP130Q9H0E3 1048 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 HMX1Q9NP08 348 aaPredicted RBP13.06□□□□□ -0.32
MKS1-201ENST00000313863 SPHK2Q9NRA0 654 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 MAN2C1Q9NTJ4 1040 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 MED17Q9NVC6 651 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 SAGE1Q9NXZ1 904 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 MRPL39Q9NYK5 338 aaKnown RBP13.06□□□□□ -0.32
MKS1-201ENST00000313863 STMN3Q9NZ72 180 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 PRKAG2Q9UGJ0 569 aa13.06□□□□□ -0.32
MKS1-201ENST00000313863 A0A0G2JPF8 293 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 PRR23AA6NEV1 266 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 HNRNPCL2B2RXH8 293 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 HNRNPCL3B7ZW38 293 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 VEGFDO43915 354 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 HPGDSO60760 199 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 SOD1P00441 154 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 CTSLP07711 333 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 LIMS3P0CW19 117 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 LIMS4P0CW20 117 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 HNRNPCL4P0DMR1 293 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 DDX6P26196 483 aaKnown RBP eCLIP13.05□□□□□ -0.321e-6■■■■■ 38.6
MKS1-201ENST00000313863 NTSP30990 170 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 SSTR4P31391 388 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 GPR1P46091 355 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 BTG1P62324 171 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 TSPAN31Q12999 210 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 RPA4Q13156 261 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.05□□□□□ -0.32
MKS1-201ENST00000313863 RASSF6Q6ZTQ3 369 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 RRM2BQ7LG56 351 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 POGLUT1Q8NBL1 392 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 OR52N1Q8NH53 320 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 SFXN5Q8TD22 340 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 DEDD2Q8WXF8 326 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 AKAP1Q92667 903 aaKnown RBP eCLIP13.05□□□□□ -0.32
MKS1-201ENST00000313863 OSTF1Q92882 214 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 MOAP1Q96BY2 351 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 MRGPRX3Q96LB0 322 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 FAIM2Q9BWQ8 316 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 ZDHHC5Q9C0B5 715 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 SMG9Q9H0W8 520 aaKnown RBP13.05□□□□□ -0.32
MKS1-201ENST00000313863 ANKRD19PQ9H560 264 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 WASH6PQ9NQA3 447 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 SLC13A4Q9UKG4 626 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 ASF1AQ9Y294 204 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 YARS2Q9Y2Z4 477 aaKnown RBP13.05□□□□□ -0.32
MKS1-201ENST00000313863 MYO10Q9HD67 2058 aa13.05□□□□□ -0.32
MKS1-201ENST00000313863 SYT5O00445 386 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 KIAA0355O15063 1070 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 NDUFS4O43181 175 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 EFCAB14O75071 495 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 POP7O75817 140 aaKnown RBP13.04□□□□□ -0.32
MKS1-201ENST00000313863 FGF19O95750 216 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 CHRM5P08912 532 aaPredicted RBP13.04□□□□□ -0.32
MKS1-201ENST00000313863 GJA1P17302 382 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 SLC1A3P43003 542 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms