RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 TICAM1Q8IUC6 712 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 TAGAPQ8N103 731 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 CCDC63Q8NA47 563 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 ACBD4Q8NC06 268 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 FAM13CQ8NE31 585 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 OR7G2Q8NG99 324 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 BTBD9Q96Q07 612 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 SECISBP2Q96T21 854 aaKnown RBP13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 ANGPTL4Q9BY76 406 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 ZFP64Q9NPA5 681 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 TNFRSF10DQ9UBN6 386 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 SUCOQ9UBS9 1254 aaKnown RBP13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 MID2Q9UJV3 735 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 PSME2Q9UL46 239 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 GPR55Q9Y2T6 319 aaPredicted RBP13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 C19orf84I3L1E1 186 aa13.38□□□□□ -0.27
PPP1CA-201ENST00000312989 ACOT7O00154 380 aa13.38□□□□□ -0.27
PPP1CA-201ENST00000312989 AQP7O14520 342 aa13.38□□□□□ -0.27
PPP1CA-201ENST00000312989 LSM1O15116 133 aaKnown RBP13.38□□□□□ -0.27
PPP1CA-201ENST00000312989 NPHS1O60500 1241 aa13.38□□□□□ -0.27
PPP1CA-201ENST00000312989 PLOD3O60568 738 aa13.38□□□□□ -0.27
PPP1CA-201ENST00000312989 NAGAP17050 411 aa13.38□□□□□ -0.27
PPP1CA-201ENST00000312989 DRD5P21918 477 aa13.38□□□□□ -0.27
PPP1CA-201ENST00000312989 CASP3P42574 277 aa13.38□□□□□ -0.27
PPP1CA-201ENST00000312989 RFTN2Q52LD8 501 aaPredicted RBP13.38□□□□□ -0.27
PPP1CA-201ENST00000312989 XKR7Q5GH72 579 aa13.38□□□□□ -0.27
PPP1CA-201ENST00000312989 RTL6Q6ICC9 239 aa13.38□□□□□ -0.27
PPP1CA-201ENST00000312989 TMEM81Q6P7N7 255 aa13.38□□□□□ -0.27
PPP1CA-201ENST00000312989 ZCCHC23Q6ZST2 131 aa13.38□□□□□ -0.27
PPP1CA-201ENST00000312989 OR5M3Q8NGP4 307 aa13.38□□□□□ -0.27
PPP1CA-201ENST00000312989 KAT2AQ92830 837 aa13.38□□□□□ -0.27
PPP1CA-201ENST00000312989 ERP27Q96DN0 273 aa13.38□□□□□ -0.27
PPP1CA-201ENST00000312989 METTL2AQ96IZ6 378 aaKnown RBP13.38□□□□□ -0.27
PPP1CA-201ENST00000312989 NODALQ96S42 347 aa13.38□□□□□ -0.27
PPP1CA-201ENST00000312989 PNPLA3Q9NST1 481 aa13.38□□□□□ -0.27
PPP1CA-201ENST00000312989 ENTPD4Q9Y227 616 aa13.38□□□□□ -0.27
PPP1CA-201ENST00000312989 FAM215AQ9Y5M1 114 aa13.38□□□□□ -0.27
PPP1CA-201ENST00000312989 ZNF780BQ9Y6R6 833 aa13.38□□□□□ -0.27
PPP1CA-201ENST00000312989 NOTCH2Q04721 2471 aa13.38□□□□□ -0.27
PPP1CA-201ENST00000312989 CSMD2Q7Z408 3487 aa13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 ATP6AP2A0A1C7CYW4 349 aa13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 FRG2CA6NGY1 282 aa13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 PRRG2O14669 202 aa13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 UGT2B11O75310 529 aa13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 PPM1BO75688 479 aa13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 ATP6AP2O75787 350 aa13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 TPOP07202 933 aa13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 BPGMP07738 259 aa13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 PRF1P14222 555 aa13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 SDC1P18827 310 aa13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 PPICP45877 212 aa13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 CASP6P55212 293 aa13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 CORO7P57737 925 aa13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 ZNF630Q2M218 657 aaPredicted RBP13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 ZNF385BQ569K4 471 aa13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 SPDYAQ5MJ70 313 aa13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 OMA1Q96E52 524 aa13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 ZNF764Q96H86 408 aaPredicted RBP13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 LCORQ96JN0 433 aaPredicted RBP13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 RILPQ96NA2 401 aa13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 GLIPR2Q9H4G4 154 aa13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 ACKR4Q9NPB9 350 aa13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 RRAGDQ9NQL2 400 aaPredicted RBP13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 BCAP29Q9UHQ4 241 aa13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 LRBAP50851 2863 aa13.37□□□□□ -0.27
PPP1CA-201ENST00000312989 DCHS2Q6V1P9 2916 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 OR14I1A6ND48 311 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 PRSS44E7EML9 344 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 NPIPA2E9PIF3 369 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 NPIPA3F8WFD2 350 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 PLOD2O00469 737 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 ACOX3O15254 700 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 SUSD5O60279 629 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 DHRS4L1P0CG22 281 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 KCNJ2P63252 427 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 PSG6Q00889 435 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 IFFO1Q0D2I5 559 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 C2orf80Q0P641 193 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 PDE7AQ13946 482 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 MPP2Q14168 576 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 GXYLT1Q4G148 440 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 TBCELQ5QJ74 424 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 HLA-DQA1Q5Y7H0 255 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 XKRXQ6PP77 449 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 IKBIPQ70UQ0 350 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 EXOC3L1Q86VI1 746 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 SAMD14Q8IZD0 417 aaPredicted RBP13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 TWIST2Q8WVJ9 160 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 DIO2Q92813 273 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 HSPBAP1Q96EW2 488 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 SLC35A4Q96G79 324 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 TMEM41AQ96HV5 264 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 C3orf30Q96M34 536 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 SMC6Q96SB8 1091 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 DOHHQ9BU89 302 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 SLC6A15Q9H2J7 730 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 LRTM1Q9HBL6 345 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 C1orf109Q9NX04 203 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 QPCTLQ9NXS2 382 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 GIMAP2Q9UG22 337 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms