RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 CDRT4Q8N9R6 151 aa16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 OR4A15Q8NGL6 344 aa16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 SPDL1Q96EA4 605 aa16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 LCORQ96JN0 433 aaPredicted RBP16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 VSTM2LQ96N03 204 aa16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 PANX1Q96RD7 426 aa16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 UTP23Q9BRU9 249 aaKnown RBP16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 TRIM45Q9H8W5 580 aaPredicted RBP16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 ZCCHC3Q9NUD5 404 aaKnown RBP16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 CCDC167Q9P0B6 97 aa16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 OR5H15A6NDH6 313 aa16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 RFXANKO14593 260 aa16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 ATXN7O15265 892 aaPredicted RBP16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 NAGAP17050 411 aa16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 UQCRC2P22695 453 aa16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 TRPC1P48995 793 aa16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 CYB561P49447 251 aa16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 CDK9P50750 372 aaKnown RBP16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 ARG2P78540 354 aa16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 ZNF155Q12901 538 aaPredicted RBP16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 TP53BP2Q13625 1128 aa16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 EXOSC7Q15024 291 aaKnown RBP16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 TIGD2Q4W5G0 525 aa16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 GKAP1Q5VSY0 366 aaPredicted RBP16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 LINC00696Q6ZRV3 163 aa16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 NUP43Q8NFH3 380 aa16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 OR9I1Q8NGQ6 314 aa16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 ASB15Q8WXK1 588 aa16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 ADIPOR1Q96A54 375 aa16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 FAM120BQ96EK7 910 aaKnown RBP16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 SGCZQ96LD1 299 aa16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 SAR1AQ9NR31 198 aa16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 SIRT3Q9NTG7 399 aaPredicted RBP16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 GIN1Q9NXP7 522 aa16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 MRTO4Q9UKD2 239 aaKnown RBP16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 VPS4AQ9UN37 437 aa16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 ARL2BPQ9Y2Y0 163 aa16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 PCDHGB3Q9Y5G1 929 aa16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 ATMQ13315 3056 aa16.58■□□□□ 0.24
SSSCA1-201ENST00000309328 A0A1W2PP18 115 aa16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 TMEM200CA6NKL6 621 aa16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 NR5A2O00482 541 aa16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 TO15178 435 aa16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 ERN1O75460 977 aaKnown RBP16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 OR2J2O76002 312 aa16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 ZCCHC18P0CG32 403 aa16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 SOX18P35713 384 aa16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 HLCSP50747 726 aa16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 ANXA11P50995 505 aaKnown RBP16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 DGKQP52824 942 aa16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 RPP38P78345 283 aaKnown RBP16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 PHC1P78364 1004 aa16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 MRPS22P82650 360 aaKnown RBP16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 TLR1Q15399 786 aa16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 COQ5Q5HYK3 327 aa16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 B3GNTL1Q67FW5 361 aaPredicted RBP16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 SZRD1Q7Z422 152 aa16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 PIGWQ7Z7B1 504 aa16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 FUNDC1Q8IVP5 155 aa16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 BEST3Q8N1M1 668 aa16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 THAP3Q8WTV1 239 aaPredicted RBP16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 RASL10BQ96S79 203 aa16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 CCT8L2Q96SF2 557 aa16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 LMF2Q9BU23 707 aaKnown RBP16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 CXorf36Q9H7Y0 433 aa16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 FOLH1BQ9HBA9 442 aa16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 Q9N2J8 555 aa16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 FAF1Q9UNN5 650 aaPredicted RBP16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 TP53TG5Q9Y2B4 290 aa16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 GPR55Q9Y2T6 319 aaPredicted RBP16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 PCDHGB6Q9Y5F9 930 aa16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 CAPN7Q9Y6W3 813 aa16.57■□□□□ 0.24
SSSCA1-201ENST00000309328 TRAV17A0A0B4J275 112 aa16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 DUXAA6NLW8 204 aa16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 BBIP1A8MTZ0 92 aa16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 A8MVJ9 347 aa16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 WWP2O00308 870 aa16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 ANGPT2O15123 496 aa16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 PRKNO60260 465 aaPredicted RBP16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 ABCB7O75027 752 aa16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 AGR2O95994 175 aa16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 ABCB1P08183 1280 aaPredicted RBP16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 SNRPB2P08579 225 aaKnown RBP16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 SOAT1P35610 550 aa16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 ZFP36L2P47974 494 aaKnown RBP16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 PSMD4P55036 377 aaKnown RBP16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 CYP27C1Q4G0S4 372 aa16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 CLECL1Q8IZS7 167 aa16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 ANKS4BQ8N8V4 417 aa16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 HOXB13Q92826 284 aaPredicted RBP16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 TMEM125Q96AQ2 219 aa16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 MAGED4Q96JG8 741 aa16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 PHF12Q96QT6 1004 aa16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 STACQ99469 402 aa16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 NPAS2Q99743 824 aa16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 ITPAQ9BY32 194 aa16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 ACTRT3Q9BYD9 372 aa16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 DUSP22Q9NRW4 184 aa16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 HPF1Q9NWY4 346 aa16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 LEF1Q9UJU2 399 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms