RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 DNAJA3Q96EY1 480 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 PYURFQ96I23 114 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 S100A14Q9HCY8 104 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 CCNB1IP1Q9NPC3 277 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 NFKBIL1Q9UBC1 381 aaPredicted RBP8.74□□□□□ -1.01
PTPRE-202ENST00000306042 TDRD15B5MCY1 1934 aaKnown RBP8.74□□□□□ -1.01
PTPRE-202ENST00000306042 PATE3B3GLJ2 98 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 STMND1H3BQB6 276 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 CLRN1P58418 232 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 PMS2CLQ68D20 193 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 OR2T5Q6IEZ7 315 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 BLOC1S3Q6QNY0 202 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 THAP5Q7Z6K1 395 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 KBTBD2Q8IY47 623 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 RNF175Q8N4F7 328 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 OR2T29Q8NH02 315 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 OR5K1Q8NHB7 308 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 BAHD1Q8TBE0 780 aaPredicted RBP8.73□□□□□ -1.01
PTPRE-202ENST00000306042 TSC22D3Q99576 134 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 DGCR6LQ9BY27 220 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 PRDM9Q9NQV7 894 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.73□□□□□ -1.01
PTPRE-202ENST00000306042 POLHQ9Y253 713 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 PCDHGB7Q9Y5F8 929 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 A0A087WXM4 84 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 A0A0G2JPF8 293 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 HNRNPCL3B7ZW38 293 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 PPP6CO00743 305 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 CYB5AP00167 134 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 HNRNPCL4P0DMR1 293 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 PTNP21246 168 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 CCNOP22674 350 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 TMEM44Q2T9K0 475 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 GGTA1PQ4G0N0 100 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 TCEAL6Q6IPX3 200 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 CACTIN-AS1Q8N1I8 211 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 OR52N2Q8NGI0 321 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 TCEAL3Q969E4 200 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 DHRS4Q9BTZ2 278 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 MS4A8Q9BY19 250 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 SLC6A16Q9GZN6 736 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 STMN3Q9NZ72 180 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 PDP2Q9P2J9 529 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 VDAC3Q9Y277 283 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 WDR37Q9Y2I8 494 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 PPIL1Q9Y3C6 166 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 SPAG17Q6Q759 2223 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 TRBV5-4A0A0C4DH59 114 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 A0A1W2PQF6 199 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 PPM1BO75688 479 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 HMGN2P05204 90 aaKnown RBP8.73□□□□□ -1.01
PTPRE-202ENST00000306042 ADORA3P0DMS8 318 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 ETFAP13804 333 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 ARNTP27540 789 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 DNAJA1P31689 397 aaKnown RBP8.73□□□□□ -1.01
PTPRE-202ENST00000306042 CDK9P50750 372 aaKnown RBP8.73□□□□□ -1.01
PTPRE-202ENST00000306042 SLC35F3Q8IY50 421 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 TSEN15Q8WW01 171 aaKnown RBP8.73□□□□□ -1.01
PTPRE-202ENST00000306042 DDIT4LQ96D03 193 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 TMEM19Q96HH6 336 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 SPRTNQ9H040 489 aaPredicted RBP8.73□□□□□ -1.01
PTPRE-202ENST00000306042 FARSAQ9Y285 508 aaKnown RBP8.73□□□□□ -1.01
PTPRE-202ENST00000306042 EEDO75530 441 aaKnown RBP8.73□□□□□ -1.01
PTPRE-202ENST00000306042 MT-ND5P03915 603 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 SLC6A6P31641 620 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 SFTPDP35247 375 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 ZNF84P51523 738 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 TRAF3Q13114 568 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 MED22Q15528 200 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 HES3Q5TGS1 186 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 LRTOMTQ8WZ04 291 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 THOC3Q96J01 351 aaKnown RBP8.73□□□□□ -1.01
PTPRE-202ENST00000306042 ALPK1Q96QP1 1244 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 SERHL2Q9H4I8 314 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 SERHLQ9NQF3 203 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 ACTR3BQ9P1U1 418 aa8.73□□□□□ -1.01
PTPRE-202ENST00000306042 MCTS1Q9ULC4 181 aaKnown RBP8.73□□□□□ -1.01
PTPRE-202ENST00000306042 ZNF638Q14966 1978 aaKnown RBP8.73□□□□□ -1.01
PTPRE-202ENST00000306042 EFCAB10A6NFE3 127 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 H3BML4 177 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 FADS2O95864 444 aaKnown RBP8.72□□□□□ -1.01
PTPRE-202ENST00000306042 PEPDP12955 493 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 FCARP24071 287 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 GNALP38405 381 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 OR1E2P47887 323 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 DEFB109BQ30KR1 87 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 KHDC1Q4VXA5 237 aaKnown RBP8.72□□□□□ -1.01
PTPRE-202ENST00000306042 CBR4Q8N4T8 237 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 OR10H4Q8NGA5 316 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 CADM1Q9BY67 442 aaKnown RBP8.72□□□□□ -1.01
PTPRE-202ENST00000306042 POLDIP3Q9BY77 421 aaKnown RBP8.72□□□□□ -1.01
PTPRE-202ENST00000306042 SMPD3Q9NY59 655 aaPredicted RBP8.72□□□□□ -1.01
PTPRE-202ENST00000306042 CBLCQ9ULV8 474 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 RNASET2O00584 256 aaKnown RBP8.72□□□□□ -1.01
PTPRE-202ENST00000306042 CTNSO60931 367 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 OR5F1O95221 314 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 IGHA2P01877 340 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 HOXC4P09017 264 aaPredicted RBP8.72□□□□□ -1.01
PTPRE-202ENST00000306042 SP9P0CG40 484 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 HSD11B1P28845 292 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms