RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 FAM227AF5H4B4 570 aa13.37□□□□□ -0.27
RAB40A-201ENST00000304236 H3BN98 237 aa13.37□□□□□ -0.27
RAB40A-201ENST00000304236 APODP05090 189 aa13.37□□□□□ -0.27
RAB40A-201ENST00000304236 HOXA6P31267 233 aa13.37□□□□□ -0.27
RAB40A-201ENST00000304236 NCBP2P52298 156 aaKnown RBP eCLIP13.37□□□□□ -0.27
RAB40A-201ENST00000304236 SFSWAPQ12872 951 aaKnown RBP13.37□□□□□ -0.27
RAB40A-201ENST00000304236 KRR1Q13601 381 aaKnown RBP13.37□□□□□ -0.27
RAB40A-201ENST00000304236 LPAL2Q16609 132 aa13.37□□□□□ -0.27
RAB40A-201ENST00000304236 TMEM196Q5HYL7 178 aa13.37□□□□□ -0.27
RAB40A-201ENST00000304236 SLC22A16Q86VW1 577 aa13.37□□□□□ -0.27
RAB40A-201ENST00000304236 ZNF513Q8N8E2 541 aaPredicted RBP13.37□□□□□ -0.27
RAB40A-201ENST00000304236 TP53I13Q8NBR0 393 aaPredicted RBP13.37□□□□□ -0.27
RAB40A-201ENST00000304236 OR56A1Q8NGH5 318 aa13.37□□□□□ -0.27
RAB40A-201ENST00000304236 TRNT1Q96Q11 434 aaKnown RBP13.37□□□□□ -0.27
RAB40A-201ENST00000304236 OR5M11Q96RB7 305 aa13.37□□□□□ -0.27
RAB40A-201ENST00000304236 C17orf62Q9BQA9 187 aa13.37□□□□□ -0.27
RAB40A-201ENST00000304236 FNDC11Q9BVV2 318 aa13.37□□□□□ -0.27
RAB40A-201ENST00000304236 OSGEPL1Q9H4B0 414 aa13.37□□□□□ -0.27
RAB40A-201ENST00000304236 SNX11Q9Y5W9 270 aa13.37□□□□□ -0.27
RAB40A-201ENST00000304236 A0A0G2JPF8 293 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 HNRNPCL2B2RXH8 293 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 HNRNPCL3B7ZW38 293 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 CASC3O15234 703 aaKnown RBP13.36□□□□□ -0.27
RAB40A-201ENST00000304236 SEMA7AO75326 666 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 NME6O75414 186 aaPredicted RBP13.36□□□□□ -0.27
RAB40A-201ENST00000304236 SCG5P05408 212 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 HNRNPCL4P0DMR1 293 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 ETV6P41212 452 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 TSFMP43897 325 aaKnown RBP13.36□□□□□ -0.27
RAB40A-201ENST00000304236 DMWDQ09019 674 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 FOXD4Q12950 439 aaPredicted RBP13.36□□□□□ -0.27
RAB40A-201ENST00000304236 TARDBPQ13148 414 aaKnown RBP eCLIP13.36□□□□□ -0.27
RAB40A-201ENST00000304236 CBX3Q13185 183 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 ENPP2Q13822 863 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 SLC25A30Q5SVS4 291 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 MFSD4BQ5TF39 518 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 KIAA1211LQ6NV74 962 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 ATCAYQ86WG3 371 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 AMER3Q8N944 861 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 OR4D11Q8NGI4 311 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 SUN3Q8TAQ9 357 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 IL4I1Q96RQ9 567 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 CENPOQ9BU64 300 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 SARGQ9BW04 601 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 MND1Q9BWT6 205 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 TAPBPLQ9BX59 468 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 RSPO3Q9BXY4 272 aaPredicted RBP13.36□□□□□ -0.27
RAB40A-201ENST00000304236 SIAEQ9HAT2 523 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 IMP3Q9NV31 184 aaKnown RBP13.36□□□□□ -0.27
RAB40A-201ENST00000304236 OR1A2Q9Y585 309 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 A0A075B6Q4 140 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 IGKV1-8A0A0C4DH67 115 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 PRAMEF27A3QJZ7 478 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 ARHGAP33O14559 1287 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 HRO43593 1189 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 KIAA0513O60268 411 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 LGI1O95970 557 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 GSTM3P21266 225 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 RPS21P63220 83 aaKnown RBP13.36□□□□□ -0.27
RAB40A-201ENST00000304236 SLAMF1Q13291 335 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 SGCGQ13326 291 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 MRM1Q6IN84 353 aaKnown RBP13.36□□□□□ -0.27
RAB40A-201ENST00000304236 ZNF793Q6ZN11 406 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 SZRD1Q7Z422 152 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 RBM45Q8IUH3 476 aaKnown RBP13.36□□□□□ -0.27
RAB40A-201ENST00000304236 SNX29P2Q8IUI4 249 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 LYSMD2Q8IV50 215 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 SLC7A13Q8TCU3 470 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 PINK1Q9BXM7 581 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 POLDIP3Q9BY77 421 aaKnown RBP13.36□□□□□ -0.27
RAB40A-201ENST00000304236 ROGDIQ9GZN7 287 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 BTBD1Q9H0C5 482 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 ZDHHC4Q9NPG8 344 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 ABCB10Q9NRK6 738 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 CRNNQ9UBG3 495 aaPredicted RBP13.36□□□□□ -0.27
RAB40A-201ENST00000304236 ENTPD4Q9Y227 616 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 ASB4Q9Y574 426 aa13.36□□□□□ -0.27
RAB40A-201ENST00000304236 ZNF292O60281 2723 aa13.35□□□□□ -0.27
RAB40A-201ENST00000304236 LOC110117498-PIK3R3F6TDL0 507 aa13.35□□□□□ -0.27
RAB40A-201ENST00000304236 ZSCAN9O15535 394 aaPredicted RBP13.35□□□□□ -0.27
RAB40A-201ENST00000304236 LRP3O75074 770 aa13.35□□□□□ -0.27
RAB40A-201ENST00000304236 SNX4O95219 450 aa13.35□□□□□ -0.27
RAB40A-201ENST00000304236 PAK4O96013 591 aaPredicted RBP13.35□□□□□ -0.27
RAB40A-201ENST00000304236 FHP07954 510 aa13.35□□□□□ -0.27
RAB40A-201ENST00000304236 ENDOUP21128 410 aaKnown RBP13.35□□□□□ -0.27
RAB40A-201ENST00000304236 DRD1P21728 446 aa13.35□□□□□ -0.27
RAB40A-201ENST00000304236 HIST1H1TP22492 207 aaPredicted RBP13.35□□□□□ -0.27
RAB40A-201ENST00000304236 BCL6P41182 706 aa13.35□□□□□ -0.27
RAB40A-201ENST00000304236 DNASE1L3Q13609 305 aa13.35□□□□□ -0.27
RAB40A-201ENST00000304236 INAVAQ3KP66 663 aa13.35□□□□□ -0.27
RAB40A-201ENST00000304236 ABHD17CQ6PCB6 329 aa13.35□□□□□ -0.27
RAB40A-201ENST00000304236 PODNL1Q6PEZ8 512 aa13.35□□□□□ -0.27
RAB40A-201ENST00000304236 WDR5BQ86VZ2 330 aa13.35□□□□□ -0.27
RAB40A-201ENST00000304236 FAM26EQ8N5C1 309 aa13.35□□□□□ -0.27
RAB40A-201ENST00000304236 PROKR2Q8NFJ6 384 aa13.35□□□□□ -0.27
RAB40A-201ENST00000304236 OR2L5Q8NG80 312 aa13.35□□□□□ -0.27
RAB40A-201ENST00000304236 OR5D16Q8NGK9 328 aa13.35□□□□□ -0.27
RAB40A-201ENST00000304236 OR9Q1Q8NGQ5 310 aa13.35□□□□□ -0.27
RAB40A-201ENST00000304236 PIK3R3Q92569 461 aa13.35□□□□□ -0.27
RAB40A-201ENST00000304236 MS4A6EQ96DS6 147 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms