RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 BEST3Q8N1M1 668 aa22.67■■□□□ 1.22
HOXC9-201ENST00000303450 TM9SF4Q92544 642 aa22.67■■□□□ 1.22
HOXC9-201ENST00000303450 MOAP1Q96BY2 351 aa22.67■■□□□ 1.22
HOXC9-201ENST00000303450 ITCHQ96J02 903 aa22.67■■□□□ 1.22
HOXC9-201ENST00000303450 FOLH1BQ9HBA9 442 aa22.67■■□□□ 1.22
HOXC9-201ENST00000303450 ZBTB20Q9HC78 741 aaPredicted RBP22.67■■□□□ 1.22
HOXC9-201ENST00000303450 EQTNQ9NQ60 294 aa22.67■■□□□ 1.22
HOXC9-201ENST00000303450 YARS2Q9Y2Z4 477 aaKnown RBP22.67■■□□□ 1.22
HOXC9-201ENST00000303450 CPAMD8Q8IZJ3 1885 aa22.67■■□□□ 1.22
HOXC9-201ENST00000303450 RFXANKO14593 260 aa22.67■■□□□ 1.22
HOXC9-201ENST00000303450 NME6O75414 186 aaPredicted RBP22.67■■□□□ 1.22
HOXC9-201ENST00000303450 PSMG1O95456 288 aa22.67■■□□□ 1.22
HOXC9-201ENST00000303450 ADSLP30566 484 aaPredicted RBP22.67■■□□□ 1.22
HOXC9-201ENST00000303450 KLF10Q13118 480 aa22.67■■□□□ 1.22
HOXC9-201ENST00000303450 GKAP1Q5VSY0 366 aaPredicted RBP22.67■■□□□ 1.22
HOXC9-201ENST00000303450 EXD3Q8N9H8 876 aa22.67■■□□□ 1.22
HOXC9-201ENST00000303450 OR56A1Q8NGH5 318 aa22.67■■□□□ 1.22
HOXC9-201ENST00000303450 OR5AK3PQ8NH89 298 aa22.67■■□□□ 1.22
HOXC9-201ENST00000303450 SFXN5Q8TD22 340 aa22.67■■□□□ 1.22
HOXC9-201ENST00000303450 ADIPOR1Q96A54 375 aa22.67■■□□□ 1.22
HOXC9-201ENST00000303450 TP53INP1Q96A56 240 aa22.67■■□□□ 1.22
HOXC9-201ENST00000303450 MS4A4EQ96PG1 132 aa22.67■■□□□ 1.22
HOXC9-201ENST00000303450 INPP5KQ9BT40 448 aa22.67■■□□□ 1.22
HOXC9-201ENST00000303450 ERVK-11Q9UQG0 969 aa22.67■■□□□ 1.22
HOXC9-201ENST00000303450 TP53TG5Q9Y2B4 290 aa22.67■■□□□ 1.22
HOXC9-201ENST00000303450 CAPN7Q9Y6W3 813 aa22.67■■□□□ 1.22
HOXC9-201ENST00000303450 ATMQ13315 3056 aa22.66■■□□□ 1.22
HOXC9-201ENST00000303450 PIEZO2Q9H5I5 2752 aa22.66■■□□□ 1.22
HOXC9-201ENST00000303450 TNRC6AQ8NDV7 1962 aaKnown RBP22.66■■□□□ 1.22
HOXC9-201ENST00000303450 SNRPB2P08579 225 aaKnown RBP22.66■■□□□ 1.22
HOXC9-201ENST00000303450 SFTPCP11686 197 aa22.66■■□□□ 1.22
HOXC9-201ENST00000303450 CD1EP15812 388 aa22.66■■□□□ 1.22
HOXC9-201ENST00000303450 CAPN3P20807 821 aa22.66■■□□□ 1.22
HOXC9-201ENST00000303450 SSR4P51571 173 aa22.66■■□□□ 1.22
HOXC9-201ENST00000303450 NR0B1P51843 470 aaKnown RBP22.66■■□□□ 1.22
HOXC9-201ENST00000303450 DCAF7P61962 342 aa22.66■■□□□ 1.22
HOXC9-201ENST00000303450 TP53BP2Q13625 1128 aa22.66■■□□□ 1.22
HOXC9-201ENST00000303450 C6orf10Q5SRN2 563 aa22.66■■□□□ 1.22
HOXC9-201ENST00000303450 BHLHB9Q6PI77 547 aa22.66■■□□□ 1.22
HOXC9-201ENST00000303450 TRIML2Q8N7C3 387 aa22.66■■□□□ 1.22
HOXC9-201ENST00000303450 ZNF441Q8N8Z8 693 aa22.66■■□□□ 1.22
HOXC9-201ENST00000303450 C17orf47Q8NEP4 570 aa22.66■■□□□ 1.22
HOXC9-201ENST00000303450 GOT1L1Q8NHS2 421 aaPredicted RBP22.66■■□□□ 1.22
HOXC9-201ENST00000303450 VSTM2LQ96N03 204 aa22.66■■□□□ 1.22
HOXC9-201ENST00000303450 TRIM4Q9C037 500 aa22.66■■□□□ 1.22
HOXC9-201ENST00000303450 SERHLQ9NQF3 203 aa22.66■■□□□ 1.22
HOXC9-201ENST00000303450 ARMCX1Q9P291 453 aa22.66■■□□□ 1.22
HOXC9-201ENST00000303450 VPS4AQ9UN37 437 aa22.66■■□□□ 1.22
HOXC9-201ENST00000303450 RNF103-CHMP3A0A140T963 221 aa22.65■■□□□ 1.22
HOXC9-201ENST00000303450 A0A1W2PP18 115 aa22.65■■□□□ 1.22
HOXC9-201ENST00000303450 K7EM74 188 aa22.65■■□□□ 1.22
HOXC9-201ENST00000303450 SLC22A2O15244 555 aa22.65■■□□□ 1.22
HOXC9-201ENST00000303450 ERN1O75460 977 aaKnown RBP22.65■■□□□ 1.22
HOXC9-201ENST00000303450 PDGFAP04085 211 aa22.65■■□□□ 1.22
HOXC9-201ENST00000303450 UQCRC2P22695 453 aa22.65■■□□□ 1.22
HOXC9-201ENST00000303450 PPICP45877 212 aa22.65■■□□□ 1.22
HOXC9-201ENST00000303450 ZNHIT3Q15649 155 aaPredicted RBP22.65■■□□□ 1.22
HOXC9-201ENST00000303450 LACTB2Q53H82 288 aaPredicted RBP22.65■■□□□ 1.22
HOXC9-201ENST00000303450 PIGGQ5H8A4 983 aa22.65■■□□□ 1.22
HOXC9-201ENST00000303450 SLC2A7Q6PXP3 512 aa22.65■■□□□ 1.22
HOXC9-201ENST00000303450 IGFL2Q6UWQ7 119 aa22.65■■□□□ 1.22
HOXC9-201ENST00000303450 ZNF621Q6ZSS3 439 aa22.65■■□□□ 1.22
HOXC9-201ENST00000303450 ASB18Q6ZVZ8 466 aa22.65■■□□□ 1.22
HOXC9-201ENST00000303450 MTERF4Q7Z6M4 381 aaKnown RBP22.65■■□□□ 1.22
HOXC9-201ENST00000303450 TAGAPQ8N103 731 aa22.65■■□□□ 1.22
HOXC9-201ENST00000303450 TMEM156Q8N614 296 aa22.65■■□□□ 1.22
HOXC9-201ENST00000303450 SLC22A8Q8TCC7 542 aa22.65■■□□□ 1.22
HOXC9-201ENST00000303450 TSPEARQ8WU66 669 aa22.65■■□□□ 1.22
HOXC9-201ENST00000303450 WBP1Q96G27 269 aa22.65■■□□□ 1.22
HOXC9-201ENST00000303450 LCORQ96JN0 433 aaPredicted RBP22.65■■□□□ 1.22
HOXC9-201ENST00000303450 RASL10BQ96S79 203 aa22.65■■□□□ 1.22
HOXC9-201ENST00000303450 NXF5Q9H1B4 397 aaKnown RBP22.65■■□□□ 1.22
HOXC9-201ENST00000303450 SLC52A3Q9NQ40 469 aa22.65■■□□□ 1.22
HOXC9-201ENST00000303450 ZNF71Q9NQZ8 489 aaPredicted RBP22.65■■□□□ 1.22
HOXC9-201ENST00000303450 PLA2G3Q9NZ20 509 aa22.65■■□□□ 1.22
HOXC9-201ENST00000303450 ANP32DO95626 131 aa22.64■■□□□ 1.21
HOXC9-201ENST00000303450 WDPCPO95876 746 aa22.64■■□□□ 1.21
HOXC9-201ENST00000303450 GSNP06396 782 aa22.64■■□□□ 1.21
HOXC9-201ENST00000303450 CASRP41180 1078 aa22.64■■□□□ 1.21
HOXC9-201ENST00000303450 CDKN2CP42773 168 aa22.64■■□□□ 1.21
HOXC9-201ENST00000303450 ST13P50502 369 aaKnown RBP22.64■■□□□ 1.21
HOXC9-201ENST00000303450 ARG2P78540 354 aa22.64■■□□□ 1.21
HOXC9-201ENST00000303450 NNATQ16517 81 aa22.64■■□□□ 1.21
HOXC9-201ENST00000303450 DNAJC14Q6Y2X3 702 aaPredicted RBP22.64■■□□□ 1.21
HOXC9-201ENST00000303450 CLEC4FQ8N1N0 589 aa22.64■■□□□ 1.21
HOXC9-201ENST00000303450 ZADH2Q8N4Q0 377 aa22.64■■□□□ 1.21
HOXC9-201ENST00000303450 GTF2H4Q92759 462 aa22.64■■□□□ 1.21
HOXC9-201ENST00000303450 BTBD9Q96Q07 612 aa22.64■■□□□ 1.21
HOXC9-201ENST00000303450 GPR55Q9Y2T6 319 aaPredicted RBP22.64■■□□□ 1.21
HOXC9-201ENST00000303450 GIMAP1-GIMAP5A0A087WTJ2 511 aa22.63■■□□□ 1.21
HOXC9-201ENST00000303450 ANGPT2O15123 496 aa22.63■■□□□ 1.21
HOXC9-201ENST00000303450 F10P00742 488 aa22.63■■□□□ 1.21
HOXC9-201ENST00000303450 HMGN2P05204 90 aaKnown RBP22.63■■□□□ 1.21
HOXC9-201ENST00000303450 DRD5P21918 477 aa22.63■■□□□ 1.21
HOXC9-201ENST00000303450 TRPC1P48995 793 aa22.63■■□□□ 1.21
HOXC9-201ENST00000303450 PRIM2P49643 509 aa22.63■■□□□ 1.21
HOXC9-201ENST00000303450 NRG3P56975 720 aa22.63■■□□□ 1.21
HOXC9-201ENST00000303450 TLR1Q15399 786 aa22.63■■□□□ 1.21
HOXC9-201ENST00000303450 MAPRE2Q15555 327 aa22.63■■□□□ 1.21
HOXC9-201ENST00000303450 MFSD12Q6NUT3 480 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms