RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 PDZD11Q5EBL8 140 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 Q6ZPB1 254 aaPredicted RBP11.78□□□□□ -0.52
ABCA3-201ENST00000301732 ZSWIM9Q86XI8 627 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 FAM83FQ8NEG4 500 aaPredicted RBP11.78□□□□□ -0.52
ABCA3-201ENST00000301732 OR52P1PQ8NH57 321 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 SUN3Q8TAQ9 357 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 ZNF775Q96BV0 537 aaPredicted RBP11.78□□□□□ -0.52
ABCA3-201ENST00000301732 RBP7Q96R05 134 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 TMEM121BQ9BXQ6 578 aaPredicted RBP11.78□□□□□ -0.52
ABCA3-201ENST00000301732 PRMT8Q9NR22 394 aaPredicted RBP11.78□□□□□ -0.52
ABCA3-201ENST00000301732 IL37Q9NZH6 218 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 DNAJB4Q9UDY4 337 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 ANKRD33BA6NCL7 494 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 TMEM225BP0DP42 221 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 BMP4P12644 408 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 TMEM44Q2T9K0 475 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 GPR149Q86SP6 731 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 NRMQ8IXM6 262 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 PAAF1Q9BRP4 392 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 A0A1W2PP55 124 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 GPR39O43194 453 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 CRTAPO75718 401 aaPredicted RBP11.78□□□□□ -0.52
ABCA3-201ENST00000301732 NR2C1P13056 603 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 IL1RNP18510 177 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 EIF2B1Q14232 305 aaKnown RBP11.78□□□□□ -0.52
ABCA3-201ENST00000301732 C10orf62Q5T681 223 aaPredicted RBP11.78□□□□□ -0.52
ABCA3-201ENST00000301732 C9orf135Q5VTT2 229 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 VASNQ6EMK4 673 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 ALKAL2Q6UX46 152 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 ADAMTS13Q76LX8 1427 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 RIMS1Q86UR5 1692 aaKnown RBP11.78□□□□□ -0.52
ABCA3-201ENST00000301732 SDR9C7Q8NEX9 313 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 ST8SIA2Q92186 375 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 MR1Q95460 341 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 FAM234AQ9H0X4 552 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 HRGP04196 525 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 ERCC1P07992 297 aaPredicted RBP11.78□□□□□ -0.52
ABCA3-201ENST00000301732 DLSTP36957 453 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 ARSDP51689 593 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 CSNK2A1P68400 391 aaPredicted RBP11.78□□□□□ -0.52
ABCA3-201ENST00000301732 SH3BP2P78314 561 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 FGL1Q08830 312 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 LY6G5CQ5SRR4 150 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 FAM198BQ6UWH4 519 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 TMEM151BQ8IW70 566 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 CSNK2A3Q8NEV1 391 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 ABHD11Q8NFV4 315 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 RANGRFQ9HD47 186 aaPredicted RBP11.78□□□□□ -0.52
ABCA3-201ENST00000301732 RNF215Q9Y6U7 377 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 KIAA1210Q9ULL0 1709 aa11.78□□□□□ -0.52
ABCA3-201ENST00000301732 GRID2O43424 1007 aa11.77□□□□□ -0.52
ABCA3-201ENST00000301732 EBLN1P0CF75 366 aa11.77□□□□□ -0.52
ABCA3-201ENST00000301732 HAPLN1P10915 354 aaPredicted RBP11.77□□□□□ -0.52
ABCA3-201ENST00000301732 CD1DP15813 335 aa11.77□□□□□ -0.52
ABCA3-201ENST00000301732 HOXD12P35452 270 aa11.77□□□□□ -0.52
ABCA3-201ENST00000301732 CRISP1P54107 249 aa11.77□□□□□ -0.52
ABCA3-201ENST00000301732 DCST2Q5T1A1 773 aa11.77□□□□□ -0.52
ABCA3-201ENST00000301732 C16orf78Q8WTQ4 265 aa11.77□□□□□ -0.52
ABCA3-201ENST00000301732 IL1F10Q8WWZ1 152 aa11.77□□□□□ -0.52
ABCA3-201ENST00000301732 APIPQ96GX9 242 aa11.77□□□□□ -0.52
ABCA3-201ENST00000301732 UHRF1Q96T88 793 aaPredicted RBP11.77□□□□□ -0.52
ABCA3-201ENST00000301732 PELOQ9BRX2 385 aaKnown RBP11.77□□□□□ -0.52
ABCA3-201ENST00000301732 PARP12Q9H0J9 701 aaKnown RBP11.77□□□□□ -0.52
ABCA3-201ENST00000301732 SLC22A2O15244 555 aa11.77□□□□□ -0.52
ABCA3-201ENST00000301732 MAOBP27338 520 aa11.77□□□□□ -0.52
ABCA3-201ENST00000301732 TBPL1P62380 186 aa11.77□□□□□ -0.52
ABCA3-201ENST00000301732 C6orf120Q7Z4R8 191 aa11.77□□□□□ -0.52
ABCA3-201ENST00000301732 ZER1Q7Z7L7 766 aa11.77□□□□□ -0.52
ABCA3-201ENST00000301732 OR51T1Q8NGJ9 327 aa11.77□□□□□ -0.52
ABCA3-201ENST00000301732 MAPK15Q8TD08 544 aa11.77□□□□□ -0.52
ABCA3-201ENST00000301732 IGSF8Q969P0 613 aa11.77□□□□□ -0.52
ABCA3-201ENST00000301732 ZNF486Q96H40 463 aaPredicted RBP11.77□□□□□ -0.52
ABCA3-201ENST00000301732 CNTNAP3BQ96NU0 1288 aa11.77□□□□□ -0.52
ABCA3-201ENST00000301732 PHB2Q99623 299 aa11.77□□□□□ -0.52
ABCA3-201ENST00000301732 PCDHGB6Q9Y5F9 930 aa11.77□□□□□ -0.52
ABCA3-201ENST00000301732 SH3PXD2BA1X283 911 aa11.77□□□□□ -0.53
ABCA3-201ENST00000301732 F5H5K5 113 aa11.77□□□□□ -0.53
ABCA3-201ENST00000301732 ILKQ13418 452 aa11.77□□□□□ -0.53
ABCA3-201ENST00000301732 TSPAN33Q86UF1 283 aa11.77□□□□□ -0.53
ABCA3-201ENST00000301732 OR4K14Q8NGD5 310 aa11.77□□□□□ -0.53
ABCA3-201ENST00000301732 NECTIN4Q96NY8 510 aa11.77□□□□□ -0.53
ABCA3-201ENST00000301732 FAM120CQ9NX05 1096 aaKnown RBP11.77□□□□□ -0.53
ABCA3-201ENST00000301732 USP22Q9UPT9 525 aa11.77□□□□□ -0.53
ABCA3-201ENST00000301732 HOXB6P17509 224 aaKnown RBP11.77□□□□□ -0.53
ABCA3-201ENST00000301732 PITPNBP48739 271 aa11.77□□□□□ -0.53
ABCA3-201ENST00000301732 AFF3P51826 1226 aaKnown RBP11.77□□□□□ -0.53
ABCA3-201ENST00000301732 LSAMPQ13449 338 aa11.77□□□□□ -0.53
ABCA3-201ENST00000301732 ZNF789Q5FWF6 425 aa11.77□□□□□ -0.53
ABCA3-201ENST00000301732 SLC30A8Q8IWU4 369 aa11.77□□□□□ -0.53
ABCA3-201ENST00000301732 HAS2Q92819 552 aa11.77□□□□□ -0.53
ABCA3-201ENST00000301732 CWH43Q9H720 699 aa11.77□□□□□ -0.53
ABCA3-201ENST00000301732 ZNF175Q9Y473 711 aa11.77□□□□□ -0.53
ABCA3-201ENST00000301732 PCDHB11Q9Y5F2 797 aa11.77□□□□□ -0.53
ABCA3-201ENST00000301732 MYH7P12883 1935 aa11.77□□□□□ -0.53
ABCA3-201ENST00000301732 PAHP00439 452 aa11.77□□□□□ -0.53
ABCA3-201ENST00000301732 MGST1P10620 155 aaKnown RBP11.77□□□□□ -0.53
ABCA3-201ENST00000301732 PORP16435 677 aaPredicted RBP11.77□□□□□ -0.53
ABCA3-201ENST00000301732 CASRP41180 1078 aa11.77□□□□□ -0.53
ABCA3-201ENST00000301732 ZNF630Q2M218 657 aaPredicted RBP11.77□□□□□ -0.53
ABCA3-201ENST00000301732 NAGSQ8N159 534 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms