RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 TAS2R7Q9NYW3 318 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 CLCA2Q9UQC9 943 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 SCN10AQ9Y5Y9 1956 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 TEX13CA0A0J9YWL9 993 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 A0A1W2PPL8 197 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 PRODHO43272 600 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 SERPINI2O75830 405 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 KLHL18O94889 574 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 EIF4EP06730 217 aaKnown RBP10.28□□□□□ -0.76
ZNF558-201ENST00000301475 OR56A5P0C7T3 313 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 ELNP15502 786 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 DUSP4Q13115 394 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 SP140Q13342 867 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 ZMYND11Q15326 602 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 EOGTQ5NDL2 527 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 PODNL1Q6PEZ8 512 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 KRT74Q7RTS7 529 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 HORMAD2Q8N7B1 307 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 WDR48Q8TAF3 677 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 ST8SIA4Q92187 359 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 OTULINQ96BN8 352 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 TMEM19Q96HH6 336 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 MS4A7Q9GZW8 240 aaPredicted RBP10.28□□□□□ -0.76
ZNF558-201ENST00000301475 RETREG1Q9H6L5 497 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 CWH43Q9H720 699 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 CXorf36Q9H7Y0 433 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 MRPS18AQ9NVS2 196 aaKnown RBP10.28□□□□□ -0.76
ZNF558-201ENST00000301475 PTTG3PQ9NZH4 202 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 FKBP7Q9Y680 259 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 IGLV3-16A0A075B6K0 115 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 GPR171O14626 319 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 COCHO43405 550 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 HRO43593 1189 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 SLC19A2O60779 497 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 MTRF1O75570 445 aaKnown RBP10.27□□□□□ -0.77
ZNF558-201ENST00000301475 TOXO94900 526 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 MPC1LP0DKB6 136 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 DNASE1P24855 282 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 HLA-FP30511 346 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 MTNR1AP48039 350 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 SLC6A11P48066 632 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 SMSP52788 366 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 CAP1Q01518 475 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 ZNF791Q3KP31 576 aaPredicted RBP10.27□□□□□ -0.77
ZNF558-201ENST00000301475 IDNKQ5T6J7 187 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 CRTC1Q6UUV9 634 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 LUZP2Q86TE4 346 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 PIAS4Q8N2W9 510 aaPredicted RBP10.27□□□□□ -0.77
ZNF558-201ENST00000301475 DBF4BQ8NFT6 615 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 OR4F15Q8NGB8 312 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 OR52H1Q8NGJ2 320 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 POF1BQ8WVV4 589 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 MARC2Q969Z3 335 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 OTUB1Q96FW1 271 aaPredicted RBP10.27□□□□□ -0.77
ZNF558-201ENST00000301475 PDXPQ96GD0 296 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 UBL7Q96S82 380 aaPredicted RBP10.27□□□□□ -0.77
ZNF558-201ENST00000301475 RBCK1Q9BYM8 510 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 GSX2Q9BZM3 304 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 EGLN3Q9H6Z9 239 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 DLL4Q9NR61 685 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 CYSLTR2Q9NS75 346 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 ADAM30Q9UKF2 790 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 A4GNTQ9UNA3 340 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 STON1Q9Y6Q2 735 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 RNF215Q9Y6U7 377 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 TMEM202A6NGA9 273 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 CSKP41240 450 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 SLC1A3P43003 542 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 ACLYP53396 1101 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 ZP1P60852 638 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 CDK5Q00535 292 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 RPL6Q02878 288 aaKnown RBP10.27□□□□□ -0.77
ZNF558-201ENST00000301475 PRKCZQ05513 592 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 BAMBIQ13145 260 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 CFAP77Q6ZQR2 320 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 GPR135Q8IZ08 494 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 CBARPQ8N350 705 aaPredicted RBP10.27□□□□□ -0.77
ZNF558-201ENST00000301475 OR5M3Q8NGP4 307 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 MRPS31Q92665 395 aaKnown RBP10.27□□□□□ -0.77
ZNF558-201ENST00000301475 RAB8BQ92930 207 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 CLP1Q92989 425 aaKnown RBP10.27□□□□□ -0.77
ZNF558-201ENST00000301475 ZSWIM3Q96MP5 696 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 ZNF578Q96N58 590 aaPredicted RBP10.27□□□□□ -0.77
ZNF558-201ENST00000301475 NLNQ9BYT8 704 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 REG4Q9BYZ8 158 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 SAP130Q9H0E3 1048 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 OSGEPL1Q9H4B0 414 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 BRD9Q9H8M2 597 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 ZNF624Q9P2J8 865 aaPredicted RBP10.27□□□□□ -0.77
ZNF558-201ENST00000301475 ACAD8Q9UKU7 415 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 OR51B4Q9Y5P0 310 aa10.27□□□□□ -0.77
ZNF558-201ENST00000301475 MEIKINA0A087WXM9 373 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 A0A1W2PRB8 838 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 TCRBP04435 133 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 HLA-DPB1P04440 258 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 ZP3P21754 424 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 AHCYP23526 432 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 THPOP40225 353 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 TAS2R50P59544 299 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 HTRA3P83110 453 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms