RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 EMC7Q9NPA0 242 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 SLC39A1Q9NY26 324 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 NUDT4Q9NZJ9 180 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 NTMQ9P121 344 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 UNC80Q8N2C7 3258 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 ZC3H12DA2A288 527 aaKnown RBP13.64□□□□□ -0.23
CDT1-201ENST00000301019 GRXCR2A6NFK2 248 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 RNGTTO60942 597 aaKnown RBP13.64□□□□□ -0.23
CDT1-201ENST00000301019 RPL34P49207 117 aaKnown RBP13.64□□□□□ -0.23
CDT1-201ENST00000301019 SLC16A1P53985 500 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 RGS7BPQ6MZT1 257 aaPredicted RBP13.64□□□□□ -0.23
CDT1-201ENST00000301019 SYNPOQ8N3V7 929 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 TMEM163Q8TC26 289 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 ORAI1Q96D31 301 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 PEX11GQ96HA9 241 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 OR4K3Q96R72 315 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 FUZQ9BT04 418 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 FAIM2Q9BWQ8 316 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 TEX10Q9NXF1 929 aaPredicted RBP13.64□□□□□ -0.23
CDT1-201ENST00000301019 FNIP2Q9P278 1114 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 RPL36Q9Y3U8 105 aaKnown RBP13.64□□□□□ -0.23
CDT1-201ENST00000301019 ZAR1LA6NP61 321 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 GABRPO00591 440 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 SEMG1P04279 462 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 CBSLP0DN79 551 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 CBSP35520 551 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 ATXN7L3Q14CW9 347 aaPredicted RBP13.64□□□□□ -0.23
CDT1-201ENST00000301019 C9orf152Q5JTZ5 239 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 ARMC5Q96C12 935 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 WDR77Q9BQA1 342 aaPredicted RBP13.64□□□□□ -0.23
CDT1-201ENST00000301019 ADGRE3Q9BY15 652 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 EGLN3Q9H6Z9 239 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 CD93Q9NPY3 652 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 FTSJ1Q9UET6 329 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 FAM183AA6NL82 134 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 H3BSH0 61 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 C6orf47O95873 294 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 APOC1P02654 83 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 WNT1P04628 370 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 PCSK2P16519 638 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 LIM2P55344 173 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 FBXL22Q6P050 247 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 KRT78Q8N1N4 520 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 BVESQ8NE79 360 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 PROKR2Q8NFJ6 384 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 OR4D10Q8NGI6 311 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 KCTD13Q8WZ19 329 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 YIPF5Q969M3 257 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 CPNE2Q96FN4 548 aaPredicted RBP13.63□□□□□ -0.23
CDT1-201ENST00000301019 SCMH1Q96GD3 660 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 KCNJ15Q99712 375 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 TREX2Q9BQ50 279 aaPredicted RBP13.63□□□□□ -0.23
CDT1-201ENST00000301019 SEMA4CQ9C0C4 833 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 ATP13A1Q9HD20 1204 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 SEMA3GQ9NS98 782 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 CNOT2Q9NZN8 540 aaKnown RBP13.63□□□□□ -0.23
CDT1-201ENST00000301019 POMT2Q9UKY4 750 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 ABHD14A-ACY1A0A1B0GW23 586 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 EIF3GO75821 320 aaKnown RBP eCLIP13.63□□□□□ -0.23
CDT1-201ENST00000301019 SPP1P10451 314 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 GPX2P18283 190 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 ANXA7P20073 488 aaKnown RBP13.63□□□□□ -0.23
CDT1-201ENST00000301019 ACHEP22303 614 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 PREPP48147 710 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 WNT4P56705 351 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 SNRPEP62304 92 aaKnown RBP13.63□□□□□ -0.23
CDT1-201ENST00000301019 FLI1Q01543 452 aaPredicted RBP13.63□□□□□ -0.23
CDT1-201ENST00000301019 HTR4Q13639 388 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 NHLRC3Q5JS37 347 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 LRRTM3Q86VH5 581 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 MMP21Q8N119 569 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 OXR1Q8N573 874 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 CHST14Q8NCH0 376 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 OR4D9Q8NGE8 314 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 DNAJB3Q8WWF6 145 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 TMEM231Q9H6L2 316 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 ST3GAL5Q9UNP4 418 aa13.63□□□□□ -0.23
CDT1-201ENST00000301019 ZNF593O00488 134 aaPredicted RBP13.62□□□□□ -0.23
CDT1-201ENST00000301019 ARPC1BO15143 372 aaKnown RBP13.62□□□□□ -0.23
CDT1-201ENST00000301019 PRICKLE3O43900 615 aaPredicted RBP13.62□□□□□ -0.23
CDT1-201ENST00000301019 KLK8O60259 260 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 SDC3O75056 442 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 MTX2O75431 263 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 B3GAT3O94766 335 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 AKR7A3O95154 331 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 FGF1P05230 155 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 PVALBP20472 110 aaPredicted RBP13.62□□□□□ -0.23
CDT1-201ENST00000301019 OPRD1P41143 372 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 WNT3P56703 355 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 LRRC37A5PQ49AS3 106 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 MLIPQ5VWP3 458 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 KLHDC9Q8NEP7 349 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 OR52E4Q8NGH9 312 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 RPLP0P6Q8NHW5 317 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 MVB12BQ9H7P6 319 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 C14orf105Q9NVL8 296 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 PCDHB9Q9Y5E1 797 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 KRBOX1C9JBD0 128 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 FFAR1O14842 300 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 HIST1H2AGP0C0S8 130 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms