RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ZIC1Q15915 447 aa20.67■□□□□ 0.9
TPM4-201ENST00000300933 P3H2Q8IVL5 708 aa20.67■□□□□ 0.9
TPM4-201ENST00000300933 OR6F1Q8NGZ6 308 aa20.67■□□□□ 0.9
TPM4-201ENST00000300933 ZCCHC10Q8TBK6 192 aa20.67■□□□□ 0.9
TPM4-201ENST00000300933 CHCHD6Q9BRQ6 235 aa20.67■□□□□ 0.9
TPM4-201ENST00000300933 OR2B2Q9GZK3 357 aa20.67■□□□□ 0.9
TPM4-201ENST00000300933 C6orf106Q9H6K1 298 aaPredicted RBP20.67■□□□□ 0.9
TPM4-201ENST00000300933 NEUROD4Q9HD90 331 aa20.67■□□□□ 0.9
TPM4-201ENST00000300933 ZW10O43264 779 aa20.66■□□□□ 0.9
TPM4-201ENST00000300933 MED26O95402 600 aa20.66■□□□□ 0.9
TPM4-201ENST00000300933 APOA1P02647 267 aa20.66■□□□□ 0.9
TPM4-201ENST00000300933 IFNW1P05000 195 aa20.66■□□□□ 0.9
TPM4-201ENST00000300933 HSMCR30P0CW71 290 aa20.66■□□□□ 0.9
TPM4-201ENST00000300933 ZNF45Q02386 682 aa20.66■□□□□ 0.9
TPM4-201ENST00000300933 AQP11Q8NBQ7 271 aa20.66■□□□□ 0.9
TPM4-201ENST00000300933 FAM131CQ96AQ9 280 aa20.66■□□□□ 0.9
TPM4-201ENST00000300933 MAPKAP1Q9BPZ7 522 aa20.66■□□□□ 0.9
TPM4-201ENST00000300933 PRR14Q9BWN1 585 aa20.66■□□□□ 0.9
TPM4-201ENST00000300933 SRMSQ9H3Y6 488 aa20.66■□□□□ 0.9
TPM4-201ENST00000300933 ENPP4Q9Y6X5 453 aa20.66■□□□□ 0.9
TPM4-201ENST00000300933 COLEC10Q9Y6Z7 277 aa20.66■□□□□ 0.9
TPM4-201ENST00000300933 FAM172BPA6NC97 362 aa20.66■□□□□ 0.9
TPM4-201ENST00000300933 IFNA14P01570 189 aa20.66■□□□□ 0.9
TPM4-201ENST00000300933 POLR2CP19387 275 aaPredicted RBP20.66■□□□□ 0.9
TPM4-201ENST00000300933 LSM11P83369 360 aaKnown RBP eCLIP20.66■□□□□ 0.92e-6■□□□□ 9.8
TPM4-201ENST00000300933 LTB4RQ15722 352 aa20.66■□□□□ 0.9
TPM4-201ENST00000300933 PRRT3Q5FWE3 981 aa20.66■□□□□ 0.9
TPM4-201ENST00000300933 COL26A1Q96A83 441 aa20.66■□□□□ 0.9
TPM4-201ENST00000300933 CENPOQ9BU64 300 aa20.66■□□□□ 0.9
TPM4-201ENST00000300933 TMEM74BQ9NUR3 256 aa20.66■□□□□ 0.9
TPM4-201ENST00000300933 A0A0C4DFX4 3053 aa20.66■□□□□ 0.9
TPM4-201ENST00000300933 M0R3H8 397 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 NR2F1P10589 423 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 CMPK1P30085 196 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 CRISP3P54108 245 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 ARPC4P59998 168 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 PROX2Q3B8N5 592 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 OR4N5Q8IXE1 308 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 TAGAPQ8N103 731 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 ASCC1Q8N9N2 400 aaKnown RBP20.65■□□□□ 0.9
TPM4-201ENST00000300933 SIMC1Q8NDZ2 872 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 KAT2AQ92830 837 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 HRASLS5Q96KN8 279 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 NDRG2Q9UN36 371 aaKnown RBP20.65■□□□□ 0.9
TPM4-201ENST00000300933 AP1M2Q9Y6Q5 423 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 HSPE1-MOB4S4R3N1 261 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 LINC00854A0A1B0GVQ3 168 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 GSAPA4D1B5 854 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 CELA2BP08218 269 aaPredicted RBP20.65■□□□□ 0.9
TPM4-201ENST00000300933 UGT2B10P36537 528 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 FRKP42685 505 aaPredicted RBP20.65■□□□□ 0.9
TPM4-201ENST00000300933 DEFA1P59665 94 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 DEFA3P59666 94 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 OLR1P78380 273 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 NFATC4Q14934 902 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 KLHL17Q6TDP4 642 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 OR2L5Q8NG80 312 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 SUN3Q8TAQ9 357 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 SLC35G5Q96KT7 338 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 WDR92Q96MX6 357 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 KCNS3Q9BQ31 491 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 TRPV5Q9NQA5 729 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 THSD1Q9NS62 852 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 SEC14L3Q9UDX4 400 aa20.65■□□□□ 0.9
TPM4-201ENST00000300933 SOX14O95416 240 aa20.64■□□□□ 0.9
TPM4-201ENST00000300933 HMGN2P05204 90 aaKnown RBP20.64■□□□□ 0.9
TPM4-201ENST00000300933 PVRP15151 417 aa20.64■□□□□ 0.9
TPM4-201ENST00000300933 PIN1Q13526 163 aaPredicted RBP20.64■□□□□ 0.9
TPM4-201ENST00000300933 SEC23BQ15437 767 aa20.64■□□□□ 0.9
TPM4-201ENST00000300933 SMUG1Q53HV7 270 aa20.64■□□□□ 0.9
TPM4-201ENST00000300933 SLX4IPQ5VYV7 408 aa20.64■□□□□ 0.9
TPM4-201ENST00000300933 Q6ZS52 159 aa20.64■□□□□ 0.9
TPM4-201ENST00000300933 VN1R4Q7Z5H5 301 aa20.64■□□□□ 0.9
TPM4-201ENST00000300933 MEX3DQ86XN8 651 aaKnown RBP20.64■□□□□ 0.9
TPM4-201ENST00000300933 SCARF2Q96GP6 870 aaPredicted RBP20.64■□□□□ 0.9
TPM4-201ENST00000300933 RAB11FIP5Q9BXF6 653 aa20.64■□□□□ 0.9
TPM4-201ENST00000300933 NMNAT1Q9HAN9 279 aaPredicted RBP20.64■□□□□ 0.9
TPM4-201ENST00000300933 PLSCR3Q9NRY6 295 aa20.64■□□□□ 0.9
TPM4-201ENST00000300933 FANCMQ8IYD8 2048 aa20.64■□□□□ 0.89
TPM4-201ENST00000300933 ZNF860A6NHJ4 632 aa20.64■□□□□ 0.89
TPM4-201ENST00000300933 CYP7B1O75881 506 aa20.64■□□□□ 0.89
TPM4-201ENST00000300933 ITGA2P17301 1181 aa20.64■□□□□ 0.89
TPM4-201ENST00000300933 HOXD11P31277 338 aaPredicted RBP20.64■□□□□ 0.89
TPM4-201ENST00000300933 HTR3AP46098 478 aa20.64■□□□□ 0.89
TPM4-201ENST00000300933 ZFP69Q49AA0 526 aa20.64■□□□□ 0.89
TPM4-201ENST00000300933 SPANXN2Q5MJ10 180 aa20.64■□□□□ 0.89
TPM4-201ENST00000300933 TCTN3Q6NUS6 607 aa20.64■□□□□ 0.89
TPM4-201ENST00000300933 OR8H2Q8N162 312 aa20.64■□□□□ 0.89
TPM4-201ENST00000300933 IPCEF1Q8WWN9 437 aaPredicted RBP20.64■□□□□ 0.89
TPM4-201ENST00000300933 ZG16BQ96DA0 208 aa20.64■□□□□ 0.89
TPM4-201ENST00000300933 TTYH2Q9BSA4 534 aa20.64■□□□□ 0.89
TPM4-201ENST00000300933 A4GALTQ9NPC4 353 aa20.64■□□□□ 0.89
TPM4-201ENST00000300933 C2orf42Q9NWW7 574 aa20.64■□□□□ 0.89
TPM4-201ENST00000300933 WBP11Q9Y2W2 641 aaKnown RBP20.64■□□□□ 0.89
TPM4-201ENST00000300933 PCDHGA2Q9Y5H1 932 aa20.64■□□□□ 0.89
TPM4-201ENST00000300933 SLCO1B1Q9Y6L6 691 aa20.64■□□□□ 0.89
TPM4-201ENST00000300933 C2CD4DB7Z1M9 353 aa20.63■□□□□ 0.89
TPM4-201ENST00000300933 ZNF888P0CJ79 500 aaPredicted RBP20.63■□□□□ 0.89
TPM4-201ENST00000300933 GABRG2P18507 467 aa20.63■□□□□ 0.89
TPM4-201ENST00000300933 PRKCDQ05655 676 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms