RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 AVL9Q8NBF6 648 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 APOBEC4Q8WW27 367 aaKnown RBP13.68□□□□□ -0.22
SMG8-201ENST00000300917 KLHL6Q8WZ60 621 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 ZNF681Q96N22 645 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 ZFYVE21Q9BQ24 234 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 C3orf14Q9HBI5 128 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 ACOT13Q9NPJ3 140 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 SLC13A4Q9UKG4 626 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 CENPVL1A0A0U1RR11 272 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 EMC8O43402 210 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 B3GALT2O43825 422 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 ST6GAL1P15907 406 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 NT5EP21589 574 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 RXRGP48443 463 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 ERV3-1Q14264 604 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 SUZ12Q15022 739 aaKnown RBP13.68□□□□□ -0.22
SMG8-201ENST00000300917 SOWAHCQ53LP3 525 aaPredicted RBP13.68□□□□□ -0.22
SMG8-201ENST00000300917 KIAA0895LQ68EN5 471 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 CLIP4Q8N3C7 705 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 ZNF420Q8TAQ5 688 aaPredicted RBP13.68□□□□□ -0.22
SMG8-201ENST00000300917 FBLIM1Q8WUP2 373 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 GGHQ92820 318 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 SPAG17Q6Q759 2223 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 ALOX12P18054 663 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 RABIFP47224 123 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 CRISP1P54107 249 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 OR4K14Q8NGD5 310 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 PIK3R3Q92569 461 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 FKBP10Q96AY3 582 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 SLC35A4Q96G79 324 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 PITX2Q99697 317 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 TUBA1CQ9BQE3 449 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 POLR2J3Q9H1A7 115 aaKnown RBP13.68□□□□□ -0.22
SMG8-201ENST00000300917 ETAA1Q9NY74 926 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 DOLKQ9UPQ8 538 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 GPC6Q9Y625 555 aaPredicted RBP13.68□□□□□ -0.22
SMG8-201ENST00000300917 CACNA1IQ9P0X4 2223 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 RDH16O75452 317 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 CDH3P22223 829 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 ALDH6A1Q02252 535 aaKnown RBP13.67□□□□□ -0.22
SMG8-201ENST00000300917 ST3GAL4Q11206 333 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 FBXO43Q4G163 708 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 FAM92BQ6ZTR7 304 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 LRRC25Q8N386 305 aaPredicted RBP13.67□□□□□ -0.22
SMG8-201ENST00000300917 NATD1Q8N6N6 113 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 ZNF614Q8N883 585 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 OR9A4Q8NGU2 314 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 RHOXF1Q8NHV9 184 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 RAB2BQ8WUD1 216 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 KLHDC7BQ96G42 594 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 GPA33Q99795 319 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 GSDMCQ9BYG8 508 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 ALOXE3Q9BYJ1 711 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 FBXO34Q9NWN3 711 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 A4GNTQ9UNA3 340 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 SPTY2D1-AS1A0A0U1RR47 76 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 TNFRSF10CO14798 259 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 FGF17O60258 216 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 PRKNO60260 465 aaPredicted RBP13.67□□□□□ -0.22
SMG8-201ENST00000300917 ITIH1P19827 911 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 CLEC12AQ5QGZ9 265 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 PIAS4Q8N2W9 510 aaPredicted RBP13.67□□□□□ -0.22
SMG8-201ENST00000300917 CSNK1A1LQ8N752 337 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 ZDHHC1Q8WTX9 485 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 UCK2Q9BZX2 261 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 TVP23BQ9NYZ1 205 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 CNIH4Q9P003 139 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 PCOLCE2Q9UKZ9 415 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 DAPP1Q9UN19 280 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 SLC9A8Q9Y2E8 581 aa13.67□□□□□ -0.22
SMG8-201ENST00000300917 LOC100506127A0A0U1RQW1 187 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 C2orf74A8MZ97 194 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 MAGEB3O15480 346 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 MBTPS2O43462 519 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 ZIC2O95409 532 aaPredicted RBP13.66□□□□□ -0.22
SMG8-201ENST00000300917 LIMS1P48059 325 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 TMBIM6P55061 237 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 TAS2R41P59536 307 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 YPEL5P62699 121 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 HPCAP84074 193 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 TNFRSF17Q02223 184 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 TMED1Q13445 227 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 DCTN2Q13561 401 aaKnown RBP13.66□□□□□ -0.22
SMG8-201ENST00000300917 COL13A1Q5TAT6 717 aaPredicted RBP13.66□□□□□ -0.22
SMG8-201ENST00000300917 ARMC6Q6NXE6 501 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 BHLHB9Q6PI77 547 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 FIGNL1Q6PIW4 674 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 ABI3BPQ7Z7G0 1075 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 B3GNT7Q8NFL0 401 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 OR4K5Q8NGD3 323 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 OR56A1Q8NGH5 318 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 C10orf90Q96M02 699 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 SLC38A1Q9H2H9 487 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 KCMF1Q9P0J7 381 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 CASC3O15234 703 aaKnown RBP13.66□□□□□ -0.22
SMG8-201ENST00000300917 ADRA2AP08913 450 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 CD36P16671 472 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 ST13P50502 369 aaKnown RBP13.66□□□□□ -0.22
SMG8-201ENST00000300917 UGT2B15P54855 530 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 SH3BGRP55822 239 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms