RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 HHEXQ03014 270 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ELOAQ14241 798 aaKnown RBP12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 KCTD18Q6PI47 426 aaPredicted RBP12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 OR5D16Q8NGK9 328 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 OR9A2Q8NGT5 310 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 RAD9AQ99638 391 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 CCM2LQ9NUG4 571 aaPredicted RBP12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 RNF186Q9NXI6 227 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 KDELR2P33947 212 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 FOXK1P85037 733 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ZNF789Q5FWF6 425 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 KRBOX4Q5JUW0 171 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 GALNT6Q8NCL4 622 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 OR52N2Q8NGI0 321 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 CPT1CQ8TCG5 803 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 DENND1AQ8TEH3 1009 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 METTL2AQ96IZ6 378 aaKnown RBP12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SAMD8Q96LT4 415 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 MGLLQ99685 303 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SLC45A1Q9Y2W3 748 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 TRIM64CA6NLI5 447 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 PTH2RP49190 550 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 TAS2R38P59533 333 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 HSD11B2P80365 405 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SCML4Q8N228 414 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 GPR137CQ8N3F9 429 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 OR14L1PQ8NHC6 308 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 FANCFQ9NPI8 374 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 A0A0U1RQK1 487 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 HOXD8P13378 290 aaPredicted RBP12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 GSTM2P28161 218 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SSTR4P31391 388 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 TRIM46Q7Z4K8 759 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ARL6Q9H0F7 186 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 PPIL3Q9H2H8 161 aaKnown RBP12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 COPZ2Q9P299 210 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 KCNIP3Q9Y2W7 256 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 RNF215Q9Y6U7 377 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 IFT172Q9UG01 1749 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SGK494L7N484 410 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ADAP00813 363 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 RHCEP18577 417 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 CD53P19397 219 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 NDUFV2P19404 249 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SCAPQ12770 1279 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 CTC1Q2NKJ3 1217 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 TP53I3Q53FA7 332 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 NAGSQ8N159 534 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 BEST3Q8N1M1 668 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 CYB561A3Q8NBI2 242 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 CCNL2Q96S94 520 aaPredicted RBP12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 FEVQ99581 238 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 HCFC1R1Q9NWW0 138 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 PRELID1Q9Y255 219 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 PCDHGA2Q9Y5H1 932 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 IQCF3P0C7M6 154 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 FOXA1P55317 472 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 PPA1Q15181 289 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 LINC00597Q9H2U6 94 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SFXN1Q9H9B4 322 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 UBE2J1Q9Y385 318 aaPredicted RBP12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 PARP4Q9UKK3 1724 aaKnown RBP12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 KNG1P01042 644 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 IFNA5P01569 189 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 IL7P13232 177 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 CTHP32929 405 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 RAB28P51157 221 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 CTXN1P60606 82 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 HTRA3P83110 453 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 HOXC5Q00444 222 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 UGT3A2Q3SY77 523 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 FIGLAQ6QHK4 219 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SYT14Q8NB59 555 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ZSCAN1Q8NBB4 408 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 RPLP0P6Q8NHW5 317 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 HOXB13Q92826 284 aaPredicted RBP12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 CREB3L1Q96BA8 519 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 LGALS12Q96DT0 336 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 FUNDC2Q9BWH2 189 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 DNTTIP1Q9H147 329 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SLC25A18Q9H1K4 315 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 HTR3BO95264 441 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 DNAJB1P25685 340 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 RFC2P35250 354 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SPHARQ15513 63 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 RAB11BQ15907 218 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 DEFB133Q30KQ1 61 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 LIPIQ6XZB0 460 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ARL14Q8N4G2 192 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 OR4D6Q8NGJ1 314 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ECHDC3Q96DC8 303 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 BORCS6Q96GS4 357 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 MMP27Q9H306 513 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 PGCP20142 388 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 CNR2P34972 360 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 CLDN2P57739 230 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 BLOC1S3Q6QNY0 202 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 AVL9Q8NBF6 648 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 GLYATL2Q8WU03 294 aa12.9□□□□□ -0.34
CHRFAM7A-201ENST00000299847 TMEM40Q8WWA1 233 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms