RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 CLEC12AQ5QGZ9 265 aa12.71□□□□□ -0.38
CTDP1-202ENST00000299543 KHDRBS2Q5VWX1 349 aaKnown RBP12.71□□□□□ -0.38
CTDP1-202ENST00000299543 LINC00299Q6ZSB3 139 aa12.71□□□□□ -0.38
CTDP1-202ENST00000299543 USP30Q70CQ3 517 aa12.71□□□□□ -0.38
CTDP1-202ENST00000299543 RASGRP3Q8IV61 690 aa12.71□□□□□ -0.38
CTDP1-202ENST00000299543 CXorf40AQ8TE69 158 aa12.71□□□□□ -0.38
CTDP1-202ENST00000299543 POF1BQ8WVV4 589 aa12.71□□□□□ -0.38
CTDP1-202ENST00000299543 OR8D1Q8WZ84 308 aa12.71□□□□□ -0.38
CTDP1-202ENST00000299543 TM4SF18Q96CE8 201 aa12.71□□□□□ -0.38
CTDP1-202ENST00000299543 SLC30A2Q9BRI3 323 aa12.71□□□□□ -0.38
CTDP1-202ENST00000299543 MS4A7Q9GZW8 240 aaPredicted RBP12.71□□□□□ -0.38
CTDP1-202ENST00000299543 IMP3Q9NV31 184 aaKnown RBP12.71□□□□□ -0.38
CTDP1-202ENST00000299543 CFL2Q9Y281 166 aa12.71□□□□□ -0.38
CTDP1-202ENST00000299543 GPR52Q9Y2T5 361 aa12.71□□□□□ -0.38
CTDP1-202ENST00000299543 SEMA7AO75326 666 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 CYP17A1P05093 508 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 CFL1P23528 166 aaKnown RBP12.7□□□□□ -0.38
CTDP1-202ENST00000299543 MYL9P24844 172 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 PDE7AQ13946 482 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 ZNF77Q15935 545 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 LAMTOR1Q6IAA8 161 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 TYW3Q6IPR3 259 aaKnown RBP12.7□□□□□ -0.38
CTDP1-202ENST00000299543 NLGN4YQ8NFZ3 816 aaPredicted RBP12.7□□□□□ -0.38
CTDP1-202ENST00000299543 SLC7A13Q8TCU3 470 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 AKAP1Q92667 903 aaKnown RBP eCLIP12.7□□□□□ -0.38
CTDP1-202ENST00000299543 BBS4Q96RK4 519 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 LGR4Q9BXB1 951 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 FTSJ1Q9UET6 329 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 MRPS7Q9Y2R9 242 aaKnown RBP12.7□□□□□ -0.38
CTDP1-202ENST00000299543 HMX3A6NHT5 357 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 TMPRSS11DO60235 418 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 DPM1O60762 260 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 SNX4O95219 450 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 CH25HO95992 272 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 MSL3P1P0C860 447 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 OSMP13725 252 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 ADRB3P13945 408 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 KELP23276 732 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 PCBP3P57721 371 aaKnown RBP12.7□□□□□ -0.38
CTDP1-202ENST00000299543 ABATP80404 500 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 LASP1Q14847 261 aaKnown RBP12.7□□□□□ -0.38
CTDP1-202ENST00000299543 EIF4HQ15056 248 aaKnown RBP12.7□□□□□ -0.38
CTDP1-202ENST00000299543 PDZK1Q5T2W1 519 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 FAM122CQ6P4D5 195 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 FAM131AQ6UXB0 335 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 IQCHQ86VS3 1027 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 KIAA1958Q8N8K9 716 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 ZFP41Q8N8Y5 198 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 SMPDL3AQ92484 453 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 COQ10AQ96MF6 247 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 ZNF607Q96SK3 696 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 TREX2Q9BQ50 279 aaPredicted RBP12.7□□□□□ -0.38
CTDP1-202ENST00000299543 ERVMER34-1Q9H9K5 563 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 ENOPH1Q9UHY7 261 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 OR1A2Q9Y585 309 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 TEX46H3BTG2 121 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 CDRT1O95170 752 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 RECKO95980 971 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 EPHX1P07099 455 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 ELAVL4P26378 380 aaKnown RBP12.7□□□□□ -0.38
CTDP1-202ENST00000299543 EVI2BP34910 448 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 MAP4K2Q12851 820 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 SNAPC1Q16533 368 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 C9orf43Q8TAL5 461 aaPredicted RBP12.7□□□□□ -0.38
CTDP1-202ENST00000299543 C1GALT1C1Q96EU7 318 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 PDXPQ96GD0 296 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 OPALINQ96PE5 141 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 RSPO3Q9BXY4 272 aaPredicted RBP12.7□□□□□ -0.38
CTDP1-202ENST00000299543 OR51I1Q9H343 314 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 ATPIF1Q9UII2 106 aa12.7□□□□□ -0.38
CTDP1-202ENST00000299543 PLXND1Q9Y4D7 1925 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 SLC9A3R1O14745 358 aaPredicted RBP12.69□□□□□ -0.38
CTDP1-202ENST00000299543 B4GALT2O60909 372 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 LILRB5O75023 590 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 NTN1O95631 604 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 SRPRAP08240 638 aaKnown RBP12.69□□□□□ -0.38
CTDP1-202ENST00000299543 GINS1Q14691 196 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 GPR68Q15743 365 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 LAX1Q8IWV1 398 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 CCDC116Q8IYX3 515 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 OR6C4Q8NGE1 309 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 OR5P2Q8WZ92 322 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 TMEM80Q96HE8 168 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 PPIL3Q9H2H8 161 aaKnown RBP12.69□□□□□ -0.38
CTDP1-202ENST00000299543 TRIM45Q9H8W5 580 aaPredicted RBP12.69□□□□□ -0.38
CTDP1-202ENST00000299543 ANKHQ9HCJ1 492 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 WASH6PQ9NQA3 447 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 SAGE1Q9NXZ1 904 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 DEC1Q9P2X7 70 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 IL20RAQ9UHF4 553 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 FBXW2Q9UKT8 454 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 YARS2Q9Y2Z4 477 aaKnown RBP12.69□□□□□ -0.38
CTDP1-202ENST00000299543 NOTCH4Q99466 2003 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 IGLON5A6NGN9 336 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 LCMT2O60294 686 aaKnown RBP12.69□□□□□ -0.38
CTDP1-202ENST00000299543 CSO75390 466 aaKnown RBP12.69□□□□□ -0.38
CTDP1-202ENST00000299543 ACP5P13686 325 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 MAPK9P45984 424 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 NCBP2P52298 156 aaKnown RBP eCLIP12.69□□□□□ -0.38
CTDP1-202ENST00000299543 ZNF91Q05481 1191 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms