RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 VDAC3Q9Y277 283 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 SCN5AQ14524 2016 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 RNASET2O00584 256 aaKnown RBP9.6□□□□□ -0.87
GABRB3-201ENST00000299267 GREM1O60565 184 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 SCRG1O75711 98 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 SEMA3DO95025 777 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 GPR75O95800 540 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 PKLRP30613 574 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 RORAP35398 523 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 AHRP35869 848 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 CPOXP36551 454 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 DEFA1P59665 94 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 DEFA3P59666 94 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 UGT3A2Q3SY77 523 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 RNASE12Q5GAN4 147 aaKnown RBP9.6□□□□□ -0.87
GABRB3-201ENST00000299267 PRAMEF17Q5VTA0 474 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 HACD2Q6Y1H2 254 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 SLC5A8Q8N695 610 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 OR51L1Q8NGJ5 315 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 BBS10Q8TAM1 723 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 SUN3Q8TAQ9 357 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 SERHL2Q9H4I8 314 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 SERHLQ9NQF3 203 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 SLC39A1Q9NY26 324 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 SH2B3Q9UQQ2 575 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 POFUT2Q9Y2G5 429 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 SDK2Q58EX2 2172 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 LOC285556D6RIA3 1793 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 METTL12A8MUP2 240 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 CER1O95813 267 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 MRPL3P09001 348 aaKnown RBP9.6□□□□□ -0.87
GABRB3-201ENST00000299267 MAOAP21397 527 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 RPP38P78345 283 aaKnown RBP9.6□□□□□ -0.87
GABRB3-201ENST00000299267 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.6□□□□□ -0.87
GABRB3-201ENST00000299267 MAP4K2Q12851 820 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 PDZK1Q5T2W1 519 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 ABHD17CQ6PCB6 329 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 SFTPA2Q8IWL1 248 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 CHERPQ8IWX8 916 aaKnown RBP9.6□□□□□ -0.87
GABRB3-201ENST00000299267 AMER2Q8N7J2 671 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 UXS1Q8NBZ7 420 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 ARRDC1-AS1Q9H2J1 176 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 CXorf36Q9H7Y0 433 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 SDHAF3Q9NRP4 125 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 RLIMQ9NVW2 624 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 RPH3AQ9Y2J0 694 aaPredicted RBP9.6□□□□□ -0.87
GABRB3-201ENST00000299267 MED16Q9Y2X0 877 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 SMIM31A0A1B0GVY4 71 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 DAPL1A0PJW8 107 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 GAPDHSO14556 408 aaPredicted RBP9.59□□□□□ -0.87
GABRB3-201ENST00000299267 MED26O95402 600 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 ACVR2AP27037 513 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 CASRP41180 1078 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 KIR2DL1P43626 348 aaPredicted RBP9.59□□□□□ -0.87
GABRB3-201ENST00000299267 KIAA1024LP59773 190 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 TLR1Q15399 786 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 ATP6AP1Q15904 470 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 C14orf28Q4W4Y0 310 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 ARMC4Q5T2S8 1044 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 LCN8Q6JVE9 175 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 RBM12BQ8IXT5 1001 aaKnown RBP9.59□□□□□ -0.87
GABRB3-201ENST00000299267 OR4K5Q8NGD3 323 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 OR2A1Q8NGT9 310 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 TM4SF18Q96CE8 201 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 BMFQ96LC9 184 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 PIP5K1AQ99755 562 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 TEX101Q9BY14 249 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 ULBP3Q9BZM4 244 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 SLITRK2Q9H156 845 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 ABCB10Q9NRK6 738 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 SERINC1Q9NRX5 453 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 CNIH4Q9P003 139 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 EPHA6Q9UF33 1036 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 TMPRSS11EQ9UL52 423 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 SNX11Q9Y5W9 270 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 SPTY2D1-AS1A0A0U1RR47 76 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 C2orf92A0A1B0GVN3 265 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 LRIT2A6NDA9 550 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 OR5K3A6NET4 321 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 FOXE1O00358 373 aaPredicted RBP9.59□□□□□ -0.87
GABRB3-201ENST00000299267 TMPRSS11DO60235 418 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 AHSA1O95433 338 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 LDOC1O95751 146 aaPredicted RBP9.59□□□□□ -0.87
GABRB3-201ENST00000299267 IGHA2P01877 340 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 RBMS1P29558 406 aaKnown RBP9.59□□□□□ -0.87
GABRB3-201ENST00000299267 SLC6A12P48065 614 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 CHRNEQ04844 493 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 KCTD21Q4G0X4 260 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 COQ5Q5HYK3 327 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 SHQ1Q6PI26 577 aaKnown RBP9.59□□□□□ -0.87
GABRB3-201ENST00000299267 VRK2Q86Y07 508 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 IQCF1Q8N6M8 205 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 MFSD9Q8NBP5 474 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 PROKR2Q8NFJ6 384 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 OR6C4Q8NGE1 309 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 OSBPL10Q9BXB5 764 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 USP36Q9P275 1121 aaKnown RBP9.59□□□□□ -0.87
GABRB3-201ENST00000299267 SPIN1Q9Y657 262 aaPredicted RBP9.59□□□□□ -0.87
GABRB3-201ENST00000299267 R4GN57 208 aa9.59□□□□□ -0.87
GABRB3-201ENST00000299267 J3KTA2 159 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms