RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 EFHD1Q9BUP0 239 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 NUDT9Q9BW91 350 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 GLIPR2Q9H4G4 154 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 REEP4Q9H6H4 257 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 ANKRA2Q9H9E1 313 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 CXorf21Q9HAI6 301 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 ADAP2Q9NPF8 381 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 SLC35C2Q9NQQ7 365 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 SDR39U1Q9NRG7 319 aaPredicted RBP5.49□□□□□ -1.53
SSX3-201ENST00000298396 PNO1Q9NRX1 252 aaKnown RBP5.49□□□□□ -1.53
SSX3-201ENST00000298396 SLC6A13Q9NSD5 602 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 SIRT3Q9NTG7 399 aaPredicted RBP5.49□□□□□ -1.53
SSX3-201ENST00000298396 MS4A12Q9NXJ0 267 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 MAT2BQ9NZL9 334 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 EHD3Q9NZN3 535 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 KLHL14Q9P2G3 628 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 ZNF639Q9UID6 485 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 UTS2RQ9UKP6 389 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 EIF3LQ9Y262 564 aaKnown RBP5.49□□□□□ -1.53
SSX3-201ENST00000298396 MRPS33Q9Y291 106 aaKnown RBP5.49□□□□□ -1.53
SSX3-201ENST00000298396 DTX4Q9Y2E6 619 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 KIAA1549Q9HCM3 1950 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 GMNCA6NCL1 334 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 ARGFXA6NJG6 315 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 C17orf105B2RV13 164 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 K7EM74 188 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 CLDN4O14493 209 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 PDPK1O15530 556 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 RRP8O43159 456 aaKnown RBP5.48□□□□□ -1.53
SSX3-201ENST00000298396 SNX3O60493 162 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 ZNF354AO60765 605 aaPredicted RBP5.48□□□□□ -1.53
SSX3-201ENST00000298396 CEACAM4O75871 244 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 PSMG1O95456 288 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 CBX7O95931 251 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 HPP00738 406 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 IGHEP01854 428 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 ATP1B1P05026 303 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 SLC35E2P0CK97 266 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 TROVE2P10155 538 aaKnown RBP eCLIP5.48□□□□□ -1.53
SSX3-201ENST00000298396 COX7A2P14406 83 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 PORP16435 677 aaPredicted RBP5.48□□□□□ -1.53
SSX3-201ENST00000298396 HOXB9P17482 250 aaPredicted RBP5.48□□□□□ -1.53
SSX3-201ENST00000298396 PIK3R1P27986 724 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 PTPN6P29350 595 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 SSTR4P31391 388 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 ASMTP46597 345 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 CDK9P50750 372 aaKnown RBP5.48□□□□□ -1.53
SSX3-201ENST00000298396 ATP4BP51164 291 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 DGKQP52824 942 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 ARFIP2P53365 341 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 TMPRSS3P57727 454 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 SLC26A5P58743 744 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 CXADRP78310 365 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 MRPS35P82673 323 aaKnown RBP5.48□□□□□ -1.53
SSX3-201ENST00000298396 STX4Q12846 297 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 MAD2L1Q13257 205 aaPredicted RBP5.48□□□□□ -1.53
SSX3-201ENST00000298396 CDK5R2Q13319 367 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 HEPACAMQ14CZ8 416 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 EXOSC7Q15024 291 aaKnown RBP5.48□□□□□ -1.53
SSX3-201ENST00000298396 TERF2Q15554 542 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 ELAVL1Q15717 326 aaKnown RBP5.48□□□□□ -1.53
SSX3-201ENST00000298396 TBR1Q16650 682 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 GSTA3Q16772 222 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 ST3GAL2Q16842 350 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 COL28A1Q2UY09 1125 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 LINC00303Q3SY05 128 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 TRMT12Q53H54 448 aaKnown RBP5.48□□□□□ -1.53
SSX3-201ENST00000298396 DCAF10Q5QP82 559 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 OR4F3Q6IEY1 312 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 C19orf48Q6RUI8 117 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 NDUFAF7Q7L592 441 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 SPATA21Q7Z572 469 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 PIGWQ7Z7B1 504 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 C9orf40Q8IXQ3 194 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 ST13P4Q8IZP2 240 aaPredicted RBP5.48□□□□□ -1.53
SSX3-201ENST00000298396 CLECL1Q8IZS7 167 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 LRRC25Q8N386 305 aaPredicted RBP5.48□□□□□ -1.53
SSX3-201ENST00000298396 ZNF615Q8N8J6 731 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 ZNF441Q8N8Z8 693 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 OR7G2Q8NG99 324 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 OR9A2Q8NGT5 310 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 SLC2A12Q8TD20 617 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 ZNF675Q8TD23 568 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 ELP5Q8TE02 316 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 KAT2AQ92830 837 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 NCLNQ969V3 563 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 TESCQ96BS2 214 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 CTHRC1Q96CG8 243 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 MTERF3Q96E29 417 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 ELAC2Q9BQ52 826 aaKnown RBP5.48□□□□□ -1.53
SSX3-201ENST00000298396 SIKE1Q9BRV8 207 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 FAIM2Q9BWQ8 316 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 DPY30Q9C005 99 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 SEMA4CQ9C0C4 833 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 FAM107BQ9H098 131 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 EPN3Q9H201 632 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 WDR41Q9HAD4 459 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 ZNF160Q9HCG1 818 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 SERHLQ9NQF3 203 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 SAR1AQ9NR31 198 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms