RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 PDXPQ96GD0 296 aa12.77□□□□□ -0.37
RPUSD4-201ENST00000298317 TMED9Q9BVK6 235 aa12.77□□□□□ -0.37
RPUSD4-201ENST00000298317 NLNQ9BYT8 704 aa12.77□□□□□ -0.37
RPUSD4-201ENST00000298317 REG4Q9BYZ8 158 aa12.77□□□□□ -0.37
RPUSD4-201ENST00000298317 DLL4Q9NR61 685 aa12.77□□□□□ -0.37
RPUSD4-201ENST00000298317 IMP3Q9NV31 184 aaKnown RBP12.77□□□□□ -0.37
RPUSD4-201ENST00000298317 FBXW2Q9UKT8 454 aa12.77□□□□□ -0.37
RPUSD4-201ENST00000298317 PADI3Q9ULW8 664 aa12.77□□□□□ -0.37
RPUSD4-201ENST00000298317 IGLV3-16A0A075B6K0 115 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 TEX13CA0A0J9YWL9 993 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 GPR171O14626 319 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 HRO43593 1189 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 RNGTTO60942 597 aaKnown RBP12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 DCDC1P59894 354 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 MC1RQ01726 317 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 INSL4Q14641 139 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 SRFBP1Q8NEF9 429 aaKnown RBP12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 DBF4BQ8NFT6 615 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 OR4D11Q8NGI4 311 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 RAET1EQ8TD07 263 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 ST8SIA4Q92187 359 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 CLP1Q92989 425 aaKnown RBP12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 PPCDCQ96CD2 204 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 LINC00052Q96N35 136 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 TM6SF2Q9BZW4 377 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 SHARPINQ9H0F6 387 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 OSGEPL1Q9H4B0 414 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 SLC35C2Q9NQQ7 365 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 ENAMQ9NRM1 1142 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 CLCA2Q9UQC9 943 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 G3V3Q6 166 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 YKT6O15498 198 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 TCRBP04435 133 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 RBMS1P29558 406 aaKnown RBP12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 SOAT1P35610 550 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 ATP5C1P36542 298 aaKnown RBP12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 MTNR1AP48039 350 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 RFX3P48380 749 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 BLVRAP53004 296 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 RPS13P62277 151 aaKnown RBP12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 TAP2Q03519 686 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 BTN1A1Q13410 526 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 ZNF273Q14593 569 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 NDUFA9Q16795 377 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 VASNQ6EMK4 673 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 SLC36A4Q6YBV0 504 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 DEF8Q6ZN54 512 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 KIAA0907Q7Z7F0 614 aaPredicted RBP12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 TSPAN33Q86UF1 283 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 NR2C2APQ86WQ0 139 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 ZNF280BQ86YH2 543 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 RBM45Q8IUH3 476 aaKnown RBP12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 OR2T4Q8NH00 348 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 OR4K3Q96R72 315 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 SEPT5Q99719 369 aaPredicted RBP12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 TMEM175Q9BSA9 504 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 SLC6A17Q9H1V8 727 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 MVB12BQ9H7P6 319 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 TBC1D17Q9HA65 648 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 FAM8A1Q9UBU6 413 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 SCP2D1Q9UJQ7 156 aa12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 KLF2Q9Y5W3 355 aaPredicted RBP12.76□□□□□ -0.37
RPUSD4-201ENST00000298317 CCDC88CQ9P219 2028 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 A0A1W2PRG6 482 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 CACNB4O00305 520 aaPredicted RBP12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 NME6O75414 186 aaPredicted RBP12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 SYPP08247 313 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 KELP23276 732 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 SLC1A3P43003 542 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 CCL23P55773 120 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 BCL2L1Q07817 233 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 ACSM1Q08AH1 577 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 ZNF155Q12901 538 aaPredicted RBP12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 PRSS53Q2L4Q9 553 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 SPDYE7PQ495Y7 208 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 ATP13A5Q4VNC0 1218 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 EOGTQ5NDL2 527 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 PLEKHS1Q5SXH7 462 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 HACD4Q5VWC8 232 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 ZNF783Q6ZMS7 281 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 SHFQ7M4L6 423 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 OTOP2Q7RTS6 562 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 ADAMTS19Q8TE59 1207 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 SMG7Q92540 1137 aaKnown RBP12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 MS4A3Q96HJ5 214 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 ASB6Q9NWX5 421 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 TRPM5Q9NZQ8 1165 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 NOD1Q9Y239 953 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 NPTNQ9Y639 398 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 LOC105369274A0A096LPK9 316 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 C2orf92A0A1B0GVN3 265 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 MFSD2BA6NFX1 497 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 TMEM189-UBE2V1I3L0A0 370 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 INPPL1O15357 1258 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 PTP4A3O75365 173 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 GJB5O95377 273 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 HMGN1P05114 100 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 MMP11P24347 488 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 EPHA4P54764 986 aa12.75□□□□□ -0.37
RPUSD4-201ENST00000298317 SMIM11AP58511 58 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms