RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 PDK3Q15120 406 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 SHQ1Q6PI26 577 aaKnown RBP21.35■■□□□ 1.01
PTX3-201ENST00000295927 ZC3H14Q6PJT7 736 aaKnown RBP21.35■■□□□ 1.01
PTX3-201ENST00000295927 KRT73Q86Y46 540 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 ST13P4Q8IZP2 240 aaPredicted RBP21.35■■□□□ 1.01
PTX3-201ENST00000295927 GPR32P1Q8NGA4 272 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 SMPD3Q9NY59 655 aaPredicted RBP21.35■■□□□ 1.01
PTX3-201ENST00000295927 SEC14L3Q9UDX4 400 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 CDC14AQ9UNH5 594 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 LIPT1Q9Y234 373 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 NINQ8N4C6 2090 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 A0A0G2JPF8 293 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 HNRNPCL2B2RXH8 293 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 HNRNPCL3B7ZW38 293 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 KHNYNO15037 678 aaKnown RBP21.35■■□□□ 1.01
PTX3-201ENST00000295927 DPM1O60762 260 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 RECKO95980 971 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 FESP07332 822 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 HNRNPCL4P0DMR1 293 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 ACP2P11117 423 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 MAOAP21397 527 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 DUSP3P51452 185 aaPredicted RBP21.35■■□□□ 1.01
PTX3-201ENST00000295927 HSD17B7P56937 341 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 MAP4K2Q12851 820 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 PRAMEF8Q5VWM4 474 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 PRAMEF7Q5VXH5 474 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 C16orf62Q7Z3J2 963 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 HIPK1Q86Z02 1210 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 CDS1Q92903 461 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 CCDC74BQ96LY2 380 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 CNBD2Q96M20 576 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 DPYSL5Q9BPU6 564 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 YIPF2Q9BWQ6 316 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 CXorf21Q9HAI6 301 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 SMURF2Q9HAU4 748 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 EXD2Q9NVH0 621 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 R4GN57 208 aa21.35■■□□□ 1.01
PTX3-201ENST00000295927 FRYLO94915 3013 aa21.34■■□□□ 1.01
PTX3-201ENST00000295927 DSCR3O14972 297 aa21.34■■□□□ 1.01
PTX3-201ENST00000295927 AGR2O95994 175 aa21.34■■□□□ 1.01
PTX3-201ENST00000295927 ETS2P15036 469 aa21.34■■□□□ 1.01
PTX3-201ENST00000295927 PRKACGP22612 351 aa21.34■■□□□ 1.01
PTX3-201ENST00000295927 DNAJA1P31689 397 aaKnown RBP21.34■■□□□ 1.01
PTX3-201ENST00000295927 KCNJ5P48544 419 aa21.34■■□□□ 1.01
PTX3-201ENST00000295927 MAPK10P53779 464 aa21.34■■□□□ 1.01
PTX3-201ENST00000295927 DUSP5Q16690 384 aa21.34■■□□□ 1.01
PTX3-201ENST00000295927 YOD1Q5VVQ6 348 aaPredicted RBP21.34■■□□□ 1.01
PTX3-201ENST00000295927 HEPHL1Q6MZM0 1159 aa21.34■■□□□ 1.01
PTX3-201ENST00000295927 VWA5B2Q8N398 1253 aa21.34■■□□□ 1.01
PTX3-201ENST00000295927 APOBEC4Q8WW27 367 aaKnown RBP21.34■■□□□ 1.01
PTX3-201ENST00000295927 RASSF5Q8WWW0 418 aa21.34■■□□□ 1.01
PTX3-201ENST00000295927 TFAP2CQ92754 450 aa21.34■■□□□ 1.01
PTX3-201ENST00000295927 GATA6Q92908 595 aa21.34■■□□□ 1.01
PTX3-201ENST00000295927 RBM18Q96H35 190 aaKnown RBP21.34■■□□□ 1.01
PTX3-201ENST00000295927 TRNT1Q96Q11 434 aaKnown RBP21.34■■□□□ 1.01
PTX3-201ENST00000295927 ZNF300Q96RE9 604 aaPredicted RBP21.34■■□□□ 1.01
PTX3-201ENST00000295927 BTBD2Q9BX70 525 aa21.34■■□□□ 1.01
PTX3-201ENST00000295927 OSBPL10Q9BXB5 764 aa21.34■■□□□ 1.01
PTX3-201ENST00000295927 AMBRA1Q9C0C7 1298 aa21.34■■□□□ 1.01
PTX3-201ENST00000295927 REEP1Q9H902 201 aa21.34■■□□□ 1.01
PTX3-201ENST00000295927 LANCL2Q9NS86 450 aa21.34■■□□□ 1.01
PTX3-201ENST00000295927 SAMHD1Q9Y3Z3 626 aaKnown RBP21.34■■□□□ 1.01
PTX3-201ENST00000295927 PCDHGA5Q9Y5G8 931 aa21.34■■□□□ 1.01
PTX3-201ENST00000295927 EIF4E1BA6NMX2 242 aaKnown RBP21.33■■□□□ 1.01
PTX3-201ENST00000295927 HPRP00739 348 aa21.33■■□□□ 1.01
PTX3-201ENST00000295927 UBTFL6P0CB48 400 aaPredicted RBP21.33■■□□□ 1.01
PTX3-201ENST00000295927 PPP2R2BQ00005 443 aa21.33■■□□□ 1.01
PTX3-201ENST00000295927 ACY1Q03154 408 aa21.33■■□□□ 1.01
PTX3-201ENST00000295927 MERTKQ12866 999 aa21.33■■□□□ 1.01
PTX3-201ENST00000295927 PUM1Q14671 1186 aaKnown RBP eCLIP21.33■■□□□ 1.01
PTX3-201ENST00000295927 EXOSC6Q5RKV6 272 aaKnown RBP21.33■■□□□ 1.01
PTX3-201ENST00000295927 ANKRD34AQ69YU3 496 aa21.33■■□□□ 1.01
PTX3-201ENST00000295927 GALNT12Q8IXK2 581 aa21.33■■□□□ 1.01
PTX3-201ENST00000295927 ZNF347Q96SE7 839 aa21.33■■□□□ 1.01
PTX3-201ENST00000295927 BARD1Q99728 777 aaKnown RBP21.33■■□□□ 1.01
PTX3-201ENST00000295927 ADI1Q9BV57 179 aa21.33■■□□□ 1.01
PTX3-201ENST00000295927 SLC38A1Q9H2H9 487 aa21.33■■□□□ 1.01
PTX3-201ENST00000295927 UBAP1Q9NZ09 502 aa21.33■■□□□ 1.01
PTX3-201ENST00000295927 USE1Q9NZ43 259 aa21.33■■□□□ 1.01
PTX3-201ENST00000295927 IFT80Q9P2H3 777 aaPredicted RBP21.33■■□□□ 1.01
PTX3-201ENST00000295927 AGRPO00253 132 aa21.33■■□□□ 1
PTX3-201ENST00000295927 SNAP29O95721 258 aa21.33■■□□□ 1
PTX3-201ENST00000295927 CBX7O95931 251 aa21.33■■□□□ 1
PTX3-201ENST00000295927 ITGA2P17301 1181 aa21.33■■□□□ 1
PTX3-201ENST00000295927 FPR1P21462 350 aa21.33■■□□□ 1
PTX3-201ENST00000295927 YAP1P46937 504 aaKnown RBP21.33■■□□□ 1
PTX3-201ENST00000295927 GK3PQ14409 553 aa21.33■■□□□ 1
PTX3-201ENST00000295927 CHERPQ8IWX8 916 aaKnown RBP21.33■■□□□ 1
PTX3-201ENST00000295927 PROX1Q92786 737 aa21.33■■□□□ 1
PTX3-201ENST00000295927 RIT1Q92963 219 aa21.33■■□□□ 1
PTX3-201ENST00000295927 DGAT2Q96PD7 388 aa21.33■■□□□ 1
PTX3-201ENST00000295927 RBM4BQ9BQ04 359 aaKnown RBP21.33■■□□□ 1
PTX3-201ENST00000295927 SPATA5L1Q9BVQ7 753 aa21.33■■□□□ 1
PTX3-201ENST00000295927 RBM4Q9BWF3 364 aaKnown RBP21.33■■□□□ 1
PTX3-201ENST00000295927 PIGUQ9H490 435 aa21.33■■□□□ 1
PTX3-201ENST00000295927 ZNF304Q9HCX3 659 aa21.33■■□□□ 1
PTX3-201ENST00000295927 NECTIN3Q9NQS3 549 aa21.33■■□□□ 1
PTX3-201ENST00000295927 CALML5Q9NZT1 146 aa21.33■■□□□ 1
PTX3-201ENST00000295927 FER1L5A0AVI2 2057 aa21.32■■□□□ 1
PTX3-201ENST00000295927 A0A1B0GX78 115 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms