RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 LUZP2Q86TE4 346 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 CTAGE3PQ8IX95 158 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 DND1Q8IYX4 353 aaKnown RBP8.46□□□□□ -1.06
CNOT9-202ENST00000295701 CENPLQ8N0S6 344 aaPredicted RBP8.46□□□□□ -1.06
CNOT9-202ENST00000295701 TAGAPQ8N103 731 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 PPM1NQ8N819 430 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 FAM83FQ8NEG4 500 aaPredicted RBP8.46□□□□□ -1.06
CNOT9-202ENST00000295701 MBD3L2Q8NHZ7 208 aaPredicted RBP8.46□□□□□ -1.06
CNOT9-202ENST00000295701 RDH11Q8TC12 318 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 UBTD2Q8WUN7 234 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 KCTD4Q8WVF5 259 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 ABTB1Q969K4 478 aaPredicted RBP8.46□□□□□ -1.06
CNOT9-202ENST00000295701 NTNG2Q96CW9 530 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 NODALQ96S42 347 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 SAP130Q9H0E3 1048 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 NXF5Q9H1B4 397 aaKnown RBP8.46□□□□□ -1.06
CNOT9-202ENST00000295701 OR10A5Q9H207 317 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 KCNF1Q9H3M0 494 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 DDX31Q9H8H2 851 aaKnown RBP8.46□□□□□ -1.06
CNOT9-202ENST00000295701 CXorf21Q9HAI6 301 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 NMRAL1Q9HBL8 299 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.46□□□□□ -1.065e-8■■■□□ 19.1
CNOT9-202ENST00000295701 JKAMPQ9P055 326 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 TXNDC16Q9P2K2 825 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 C15orf41Q9Y2V0 281 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 JMJD1CQ15652 2540 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 CSPG4Q6UVK1 2322 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 CD8B2A6NJW9 211 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 KERAO60938 352 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 NME6O75414 186 aaPredicted RBP8.45□□□□□ -1.06
CNOT9-202ENST00000295701 SIX3O95343 332 aaPredicted RBP8.45□□□□□ -1.06
CNOT9-202ENST00000295701 INHBBP09529 407 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 LTA4HP09960 611 aaKnown RBP8.45□□□□□ -1.06
CNOT9-202ENST00000295701 SLC35E2P0CK97 266 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 TMIGD3P0DMS9 266 aaPredicted RBP8.45□□□□□ -1.06
CNOT9-202ENST00000295701 PTX3P26022 381 aaPredicted RBP8.45□□□□□ -1.06
CNOT9-202ENST00000295701 ABCD3P28288 659 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 PTPN6P29350 595 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 SPRP35270 261 aaPredicted RBP8.45□□□□□ -1.06
CNOT9-202ENST00000295701 PEX19P40855 299 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 PIK3CBP42338 1070 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 MASP1P48740 699 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 STARP49675 285 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 DCAF7P61962 342 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 SRYQ05066 204 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 DUSP2Q05923 314 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 FUT7Q11130 342 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 SLMAPQ14BN4 828 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 SETDB1Q15047 1291 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 TRADDQ15628 312 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 PFKFB4Q16877 469 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 KBTBD12Q3ZCT8 623 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 NHSL2Q5HYW2 709 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 GRTP1Q5TC63 336 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 LIPJQ5W064 366 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 HLA-DQA1Q5Y7H0 255 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 FAM180BQ6P0A1 224 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 CYP20A1Q6UW02 462 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 GOLGA7Q7Z5G4 137 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 KIF18BQ86Y91 864 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 PM20D2Q8IYS1 436 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 CIARTQ8N365 385 aaPredicted RBP8.45□□□□□ -1.06
CNOT9-202ENST00000295701 C7orf57Q8NEG2 295 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 WDR20Q8TBZ3 569 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 CDKL2Q92772 493 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 TP53INP1Q96A56 240 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 MRRFQ96E11 262 aaKnown RBP8.45□□□□□ -1.06
CNOT9-202ENST00000295701 HSPBAP1Q96EW2 488 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 LRRC46Q96FV0 321 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 TUBA1CQ9BQE3 449 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 PELOQ9BRX2 385 aaKnown RBP8.45□□□□□ -1.06
CNOT9-202ENST00000295701 YIPF4Q9BSR8 244 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 RBM24Q9BX46 236 aaKnown RBP8.45□□□□□ -1.06
CNOT9-202ENST00000295701 CALHM2Q9HA72 323 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 GALNT9Q9HCQ5 603 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 SNX15Q9NRS6 342 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 LYARQ9NX58 379 aaKnown RBP8.45□□□□□ -1.06
CNOT9-202ENST00000295701 GRHL1Q9NZI5 618 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 EHD3Q9NZN3 535 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 FOXD3Q9UJU5 478 aaPredicted RBP8.45□□□□□ -1.06
CNOT9-202ENST00000295701 MAPRE3Q9UPY8 281 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 ANGPTL3Q9Y5C1 460 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 IKBKGQ9Y6K9 419 aa8.45□□□□□ -1.06
CNOT9-202ENST00000295701 TLN2Q9Y4G6 2542 aa8.44□□□□□ -1.06
CNOT9-202ENST00000295701 NSD1Q96L73 2696 aaPredicted RBP8.44□□□□□ -1.06
CNOT9-202ENST00000295701 HMX2A2RU54 273 aa8.44□□□□□ -1.06
CNOT9-202ENST00000295701 CAPN14A8MX76 684 aa8.44□□□□□ -1.06
CNOT9-202ENST00000295701 H0YIV9 168 aa8.44□□□□□ -1.06
CNOT9-202ENST00000295701 J3QW42 95 aa8.44□□□□□ -1.06
CNOT9-202ENST00000295701 ZSCAN12O43309 604 aa8.44□□□□□ -1.06
CNOT9-202ENST00000295701 ICOSLGO75144 302 aa8.44□□□□□ -1.06
CNOT9-202ENST00000295701 SNX4O95219 450 aa8.44□□□□□ -1.06
CNOT9-202ENST00000295701 LY6G6DO95868 133 aa8.44□□□□□ -1.06
CNOT9-202ENST00000295701 KLK1P06870 262 aa8.44□□□□□ -1.06
CNOT9-202ENST00000295701 NT5EP21589 574 aa8.44□□□□□ -1.06
CNOT9-202ENST00000295701 GPX3P22352 226 aa8.44□□□□□ -1.06
CNOT9-202ENST00000295701 CNTFP26441 200 aa8.44□□□□□ -1.06
CNOT9-202ENST00000295701 PIK3R1P27986 724 aa8.44□□□□□ -1.06
CNOT9-202ENST00000295701 ADSLP30566 484 aaPredicted RBP8.44□□□□□ -1.06
CNOT9-202ENST00000295701 SERPINB1P30740 379 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms