RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 INAQ16352 499 aa18.79■□□□□ 0.6
CXCL16-201ENST00000293778 PRRT3Q5FWE3 981 aa18.79■□□□□ 0.6
CXCL16-201ENST00000293778 USP43Q70EL4 1123 aa18.79■□□□□ 0.6
CXCL16-201ENST00000293778 LINC00471Q8N535 108 aa18.79■□□□□ 0.6
CXCL16-201ENST00000293778 MCFD2Q8NI22 146 aa18.79■□□□□ 0.6
CXCL16-201ENST00000293778 NT5CQ8TCD5 201 aa18.79■□□□□ 0.6
CXCL16-201ENST00000293778 PPP1R14BQ96C90 147 aa18.79■□□□□ 0.6
CXCL16-201ENST00000293778 QRSL1Q9H0R6 528 aaKnown RBP18.79■□□□□ 0.6
CXCL16-201ENST00000293778 IFT52Q9Y366 437 aa18.79■□□□□ 0.6
CXCL16-201ENST00000293778 TP53P04637 393 aaPredicted RBP18.78■□□□□ 0.6
CXCL16-201ENST00000293778 TNNI3P19429 210 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 HNRNPA2B1P22626 353 aaKnown RBP18.78■□□□□ 0.6
CXCL16-201ENST00000293778 MAN2A2P49641 1150 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 KIR2DS3Q14952 304 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 LTB4RQ15722 352 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 TMEM201Q5SNT2 666 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 TRIM69Q86WT6 500 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 SNRNP27Q8WVK2 155 aaKnown RBP18.78■□□□□ 0.6
CXCL16-201ENST00000293778 KAT2AQ92830 837 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 OR5M11Q96RB7 305 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 CTPS2Q9NRF8 586 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 DNAJC27Q9NZQ0 273 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 GOLGA4Q13439 2230 aaKnown RBP18.78■□□□□ 0.6
CXCL16-201ENST00000293778 LOC100506127A0A0U1RQW1 187 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 ASNA1O43681 348 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 MAGP20916 626 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 MMP11P24347 488 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 ALDH6A1Q02252 535 aaKnown RBP18.78■□□□□ 0.6
CXCL16-201ENST00000293778 COX10Q12887 443 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 MED22Q15528 200 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 NDUFA9Q16795 377 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 ZNF311Q5JNZ3 666 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 FBXO42Q6P3S6 717 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 CD300LDQ6UXZ3 194 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 ZER1Q7Z7L7 766 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 IQCHQ86VS3 1027 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 OR8J1Q8NGP2 316 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 WDR36Q8NI36 951 aaKnown RBP18.78■□□□□ 0.6
CXCL16-201ENST00000293778 FLVCR1-AS1Q8TAF5 88 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 OR51E2Q9H255 320 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 SLC38A1Q9H2H9 487 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 PIAS3Q9Y6X2 628 aa18.78■□□□□ 0.6
CXCL16-201ENST00000293778 F5P12259 2224 aa18.77■□□□□ 0.6
CXCL16-201ENST00000293778 A6NCN8 305 aa18.77■□□□□ 0.6
CXCL16-201ENST00000293778 PSMD7P51665 324 aa18.77■□□□□ 0.6
CXCL16-201ENST00000293778 SFSWAPQ12872 951 aaKnown RBP18.77■□□□□ 0.6
CXCL16-201ENST00000293778 MORN4Q8NDC4 146 aa18.77■□□□□ 0.6
CXCL16-201ENST00000293778 C10orf90Q96M02 699 aa18.77■□□□□ 0.6
CXCL16-201ENST00000293778 MGLLQ99685 303 aa18.77■□□□□ 0.6
CXCL16-201ENST00000293778 CALML5Q9NZT1 146 aa18.77■□□□□ 0.6
CXCL16-201ENST00000293778 LIPT1Q9Y234 373 aa18.77■□□□□ 0.6
CXCL16-201ENST00000293778 PCDHGA3Q9Y5H0 932 aa18.77■□□□□ 0.6
CXCL16-201ENST00000293778 MYO9BQ13459 2157 aa18.77■□□□□ 0.6
CXCL16-201ENST00000293778 ALPPP05187 535 aa18.77■□□□□ 0.59
CXCL16-201ENST00000293778 NDUFV2P19404 249 aa18.77■□□□□ 0.59
CXCL16-201ENST00000293778 DRD1P21728 446 aa18.77■□□□□ 0.59
CXCL16-201ENST00000293778 SNRPNP63162 240 aaKnown RBP18.77■□□□□ 0.59
CXCL16-201ENST00000293778 CHRNEQ04844 493 aa18.77■□□□□ 0.59
CXCL16-201ENST00000293778 TMEM31Q5JXX7 168 aa18.77■□□□□ 0.59
CXCL16-201ENST00000293778 ATAD3BQ5T9A4 648 aa18.77■□□□□ 0.59
CXCL16-201ENST00000293778 C16orf62Q7Z3J2 963 aa18.77■□□□□ 0.59
CXCL16-201ENST00000293778 ZNF554Q86TJ5 538 aa18.77■□□□□ 0.59
CXCL16-201ENST00000293778 TCEANCQ8N8B7 351 aa18.77■□□□□ 0.59
CXCL16-201ENST00000293778 KBTBD8Q8NFY9 601 aa18.77■□□□□ 0.59
CXCL16-201ENST00000293778 KLHL6Q8WZ60 621 aa18.77■□□□□ 0.59
CXCL16-201ENST00000293778 TRNT1Q96Q11 434 aaKnown RBP18.77■□□□□ 0.59
CXCL16-201ENST00000293778 OR2A14Q96R47 310 aa18.77■□□□□ 0.59
CXCL16-201ENST00000293778 ACTRT3Q9BYD9 372 aa18.77■□□□□ 0.59
CXCL16-201ENST00000293778 DSN1Q9H410 356 aa18.77■□□□□ 0.59
CXCL16-201ENST00000293778 SLC13A4Q9UKG4 626 aa18.77■□□□□ 0.59
CXCL16-201ENST00000293778 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.76■□□□□ 0.59
CXCL16-201ENST00000293778 SYT5O00445 386 aa18.76■□□□□ 0.59
CXCL16-201ENST00000293778 TNFRSF10CO14798 259 aa18.76■□□□□ 0.59
CXCL16-201ENST00000293778 UGT2B7P16662 529 aa18.76■□□□□ 0.59
CXCL16-201ENST00000293778 CPN2P22792 545 aa18.76■□□□□ 0.59
CXCL16-201ENST00000293778 SRP54P61011 504 aaKnown RBP18.76■□□□□ 0.59
CXCL16-201ENST00000293778 MRPS21P82921 87 aaKnown RBP18.76■□□□□ 0.59
CXCL16-201ENST00000293778 TNFRSF17Q02223 184 aa18.76■□□□□ 0.59
CXCL16-201ENST00000293778 ZNF404Q494X3 552 aa18.76■□□□□ 0.59
CXCL16-201ENST00000293778 MEDAGQ5VYS4 303 aa18.76■□□□□ 0.59
CXCL16-201ENST00000293778 WDR53Q7Z5U6 358 aaPredicted RBP18.76■□□□□ 0.59
CXCL16-201ENST00000293778 IQCF1Q8N6M8 205 aa18.76■□□□□ 0.59
CXCL16-201ENST00000293778 ZCCHC10Q8TBK6 192 aa18.76■□□□□ 0.59
CXCL16-201ENST00000293778 TM4SF19Q96DZ7 209 aa18.76■□□□□ 0.59
CXCL16-201ENST00000293778 GIMAP5Q96F15 307 aa18.76■□□□□ 0.59
CXCL16-201ENST00000293778 CHCHD6Q9BRQ6 235 aa18.76■□□□□ 0.59
CXCL16-201ENST00000293778 MMP27Q9H306 513 aa18.76■□□□□ 0.59
CXCL16-201ENST00000293778 GIN1Q9NXP7 522 aa18.76■□□□□ 0.59
CXCL16-201ENST00000293778 PHF11Q9UIL8 331 aa18.76■□□□□ 0.59
CXCL16-201ENST00000293778 KLK4Q9Y5K2 254 aa18.76■□□□□ 0.59
CXCL16-201ENST00000293778 METTL15A6NJ78 407 aa18.76■□□□□ 0.59
CXCL16-201ENST00000293778 DBTP11182 482 aaKnown RBP18.76■□□□□ 0.59
CXCL16-201ENST00000293778 TPMTP51580 245 aa18.76■□□□□ 0.59
CXCL16-201ENST00000293778 LSM11P83369 360 aaKnown RBP eCLIP18.76■□□□□ 0.59
CXCL16-201ENST00000293778 SUZ12Q15022 739 aaKnown RBP18.76■□□□□ 0.59
CXCL16-201ENST00000293778 TSTQ16762 297 aaKnown RBP18.76■□□□□ 0.59
CXCL16-201ENST00000293778 C1orf94Q6P1W5 598 aa18.76■□□□□ 0.59
CXCL16-201ENST00000293778 VRK2Q86Y07 508 aa18.76■□□□□ 0.59
CXCL16-201ENST00000293778 LRRC25Q8N386 305 aaPredicted RBP18.76■□□□□ 0.59
CXCL16-201ENST00000293778 OR10G6Q8NH81 332 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms