RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 SGCZQ96LD1 299 aa8.99□□□□□ -0.97
CCDC58-201ENST00000291458 GATA5Q9BWX5 397 aaPredicted RBP8.99□□□□□ -0.97
CCDC58-201ENST00000291458 CENPHQ9H3R5 247 aa8.99□□□□□ -0.97
CCDC58-201ENST00000291458 PPCSQ9HAB8 311 aa8.99□□□□□ -0.97
CCDC58-201ENST00000291458 IL1RL2Q9HB29 575 aa8.99□□□□□ -0.97
CCDC58-201ENST00000291458 ALKBH4Q9NXW9 302 aa8.99□□□□□ -0.97
CCDC58-201ENST00000291458 MID2Q9UJV3 735 aa8.99□□□□□ -0.97
CCDC58-201ENST00000291458 BOKQ9UMX3 212 aaPredicted RBP8.99□□□□□ -0.97
CCDC58-201ENST00000291458 ZNF835Q9Y2P0 537 aa8.99□□□□□ -0.97
CCDC58-201ENST00000291458 CHCHD2Q9Y6H1 151 aaPredicted RBP8.99□□□□□ -0.97
CCDC58-201ENST00000291458 DOPEY1Q5JWR5 2465 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 TP53I11O14683 189 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 GNB5O14775 395 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 AKAP10O43572 662 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 JUNP05412 331 aaKnown RBP8.98□□□□□ -0.97
CCDC58-201ENST00000291458 CREB1P16220 341 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 HTR1EP28566 365 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 ALDH3A1P30838 453 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 MAN2A2P49641 1150 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 NCBP2P52298 156 aaKnown RBP eCLIP8.98□□□□□ -0.973e-6■□□□□ 9.3
CCDC58-201ENST00000291458 SMSP52788 366 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 NRG3P56975 720 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 TRA2BP62995 288 aaKnown RBP8.98□□□□□ -0.97
CCDC58-201ENST00000291458 RPL38P63173 70 aaKnown RBP8.98□□□□□ -0.97
CCDC58-201ENST00000291458 SLC18A2Q05940 514 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 C2orf80Q0P641 193 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 FUT7Q11130 342 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 PRSS53Q2L4Q9 553 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 KRT71Q3SY84 523 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 GALNTL6Q49A17 601 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 SH2D4BQ5SQS7 431 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 ANKRD26P1Q6NSI1 321 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 ARHGAP11AQ6P4F7 1023 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 RPTNQ6XPR3 784 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 Q6ZPB1 254 aaPredicted RBP8.98□□□□□ -0.97
CCDC58-201ENST00000291458 SZRD1Q7Z422 152 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 TRABD2AQ86V40 505 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 TICAM1Q8IUC6 712 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 DDIASQ8IXT1 998 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 FAM9CQ8IZT9 166 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 LIX1Q8N485 282 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 MARVELD2Q8N4S9 558 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 ZNF808Q8N4W9 903 aaPredicted RBP8.98□□□□□ -0.97
CCDC58-201ENST00000291458 ZNF615Q8N8J6 731 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 ZNF441Q8N8Z8 693 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 C7orf57Q8NEG2 295 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 ADIPOR1Q96A54 375 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 SDCCAG3Q96C92 435 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 OMA1Q96E52 524 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 PKNOX2Q96KN3 472 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 ZNF597Q96LX8 424 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 RILPQ96NA2 401 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 BBS4Q96RK4 519 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 ZNF703Q9H7S9 590 aaPredicted RBP8.98□□□□□ -0.97
CCDC58-201ENST00000291458 METTL7AQ9H8H3 244 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 GALNT9Q9HCQ5 603 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 MIEF1Q9NQG6 463 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 PNPLA3Q9NST1 481 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 OXSMQ9NWU1 459 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 GIMAP2Q9UG22 337 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 CNOT11Q9UKZ1 510 aaKnown RBP8.98□□□□□ -0.97
CCDC58-201ENST00000291458 PSME2Q9UL46 239 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 NPFFR2Q9Y5X5 522 aa8.98□□□□□ -0.97
CCDC58-201ENST00000291458 UTP20O75691 2785 aaKnown RBP8.97□□□□□ -0.97
CCDC58-201ENST00000291458 C15orf38-AP3S2A0A0A6YYH1 394 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 C19orf84I3L1E1 186 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 AZIN1O14977 448 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 SEC22BO75396 215 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 SKAP2O75563 359 aaPredicted RBP8.97□□□□□ -0.97
CCDC58-201ENST00000291458 TRAPPC6AO75865 159 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 GLSO94925 669 aaPredicted RBP8.97□□□□□ -0.97
CCDC58-201ENST00000291458 ATP1B1P05026 303 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 NUDT17P0C025 328 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 LINC00032P0C843 101 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 UROSP10746 265 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 EFNA1P20827 205 aaPredicted RBP8.97□□□□□ -0.97
CCDC58-201ENST00000291458 S1PR1P21453 382 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 ABCD3P28288 659 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 NTSP30990 170 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 GALNSP34059 522 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 MC3RP41968 323 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 RFX3P48380 749 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 TMED10P49755 219 aaKnown RBP8.97□□□□□ -0.97
CCDC58-201ENST00000291458 CORO7P57737 925 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 DNAJB13P59910 316 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 MGAT2Q10469 447 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 FOXO1Q12778 655 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 HEPACAMQ14CZ8 416 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 NTRK2Q16620 822 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 ZNF628Q5EBL2 1059 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 LCE2AQ5TA79 106 aaPredicted RBP8.97□□□□□ -0.97
CCDC58-201ENST00000291458 TMEM198Q66K66 360 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 EMBQ6PCB8 327 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 PAOXQ6QHF9 649 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 TMEM107Q6UX40 140 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 BNC2Q6ZN30 1099 aaPredicted RBP8.97□□□□□ -0.97
CCDC58-201ENST00000291458 WDR53Q7Z5U6 358 aaPredicted RBP8.97□□□□□ -0.97
CCDC58-201ENST00000291458 CCDC71Q8IV32 467 aaPredicted RBP8.97□□□□□ -0.97
CCDC58-201ENST00000291458 SLC15A4Q8N697 577 aa8.97□□□□□ -0.97
CCDC58-201ENST00000291458 BANPQ8N9N5 519 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms