RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 UBDO15205 165 aa24.84■■□□□ 1.57
SSU72-201ENST00000291386 POLR3GO15318 223 aaPredicted RBP24.84■■□□□ 1.57
SSU72-201ENST00000291386 SLC25A12O75746 678 aa24.84■■□□□ 1.57
SSU72-201ENST00000291386 FBXO45P0C2W1 286 aa24.84■■□□□ 1.57
SSU72-201ENST00000291386 GPC1P35052 558 aa24.84■■□□□ 1.57
SSU72-201ENST00000291386 MDH1P40925 334 aaKnown RBP24.84■■□□□ 1.57
SSU72-201ENST00000291386 MRPL19P49406 292 aaKnown RBP24.84■■□□□ 1.57
SSU72-201ENST00000291386 PSPHP78330 225 aa24.84■■□□□ 1.57
SSU72-201ENST00000291386 GUCY1A3Q02108 690 aa24.84■■□□□ 1.57
SSU72-201ENST00000291386 ZNF791Q3KP31 576 aaPredicted RBP24.84■■□□□ 1.57
SSU72-201ENST00000291386 TMEM198Q66K66 360 aa24.84■■□□□ 1.57
SSU72-201ENST00000291386 GOLM1Q8NBJ4 401 aa24.84■■□□□ 1.57
SSU72-201ENST00000291386 LCORQ96JN0 433 aaPredicted RBP24.84■■□□□ 1.57
SSU72-201ENST00000291386 SGCZQ96LD1 299 aa24.84■■□□□ 1.57
SSU72-201ENST00000291386 C5orf34Q96MH7 638 aa24.84■■□□□ 1.57
SSU72-201ENST00000291386 BTBD9Q96Q07 612 aa24.84■■□□□ 1.57
SSU72-201ENST00000291386 NXF5Q9H1B4 397 aaKnown RBP24.84■■□□□ 1.57
SSU72-201ENST00000291386 SDR39U1Q9NRG7 319 aaPredicted RBP24.84■■□□□ 1.57
SSU72-201ENST00000291386 DDX18Q9NVP1 670 aaKnown RBP24.84■■□□□ 1.57
SSU72-201ENST00000291386 GPR55Q9Y2T6 319 aaPredicted RBP24.84■■□□□ 1.57
SSU72-201ENST00000291386 TTLL8A6PVC2 850 aa24.83■■□□□ 1.57
SSU72-201ENST00000291386 RNASET2O00584 256 aaKnown RBP24.83■■□□□ 1.57
SSU72-201ENST00000291386 TO15178 435 aa24.83■■□□□ 1.57
SSU72-201ENST00000291386 ACOX3O15254 700 aa24.83■■□□□ 1.57
SSU72-201ENST00000291386 NME2P1O60361 137 aa24.83■■□□□ 1.57
SSU72-201ENST00000291386 NME2P22392 152 aa24.83■■□□□ 1.57
SSU72-201ENST00000291386 CDK9P50750 372 aaKnown RBP24.83■■□□□ 1.57
SSU72-201ENST00000291386 WNT3P56703 355 aa24.83■■□□□ 1.57
SSU72-201ENST00000291386 UFM1P61960 85 aa24.83■■□□□ 1.57
SSU72-201ENST00000291386 IL20RBQ6UXL0 311 aa24.83■■□□□ 1.57
SSU72-201ENST00000291386 RTL4Q6ZR62 310 aa24.83■■□□□ 1.57
SSU72-201ENST00000291386 GLB1L3Q8NCI6 653 aaPredicted RBP24.83■■□□□ 1.57
SSU72-201ENST00000291386 TMEM125Q96AQ2 219 aa24.83■■□□□ 1.57
SSU72-201ENST00000291386 SPACA9Q96E40 222 aaPredicted RBP24.83■■□□□ 1.57
SSU72-201ENST00000291386 TEX37Q96LM6 180 aa24.83■■□□□ 1.57
SSU72-201ENST00000291386 FOLH1BQ9HBA9 442 aa24.83■■□□□ 1.57
SSU72-201ENST00000291386 SIRT3Q9NTG7 399 aaPredicted RBP24.83■■□□□ 1.57
SSU72-201ENST00000291386 ZIM2Q9NZV7 527 aa24.83■■□□□ 1.57
SSU72-201ENST00000291386 ERVK-11Q9UQG0 969 aa24.83■■□□□ 1.57
SSU72-201ENST00000291386 FRG2CA6NGY1 282 aa24.82■■□□□ 1.56
SSU72-201ENST00000291386 E9PBE3 544 aa24.82■■□□□ 1.56
SSU72-201ENST00000291386 SCN2BO60939 215 aa24.82■■□□□ 1.56
SSU72-201ENST00000291386 NAGAP17050 411 aa24.82■■□□□ 1.56
SSU72-201ENST00000291386 KIR3DL1P43629 444 aa24.82■■□□□ 1.56
SSU72-201ENST00000291386 NRG3P56975 720 aa24.82■■□□□ 1.56
SSU72-201ENST00000291386 RPS6KA2Q15349 733 aa24.82■■□□□ 1.56
SSU72-201ENST00000291386 INPP5JQ15735 1006 aaPredicted RBP24.82■■□□□ 1.56
SSU72-201ENST00000291386 PGS1Q32NB8 556 aa24.82■■□□□ 1.56
SSU72-201ENST00000291386 PRICKLE2Q7Z3G6 844 aa24.82■■□□□ 1.56
SSU72-201ENST00000291386 BARD1Q99728 777 aaKnown RBP24.82■■□□□ 1.56
SSU72-201ENST00000291386 C3orf14Q9HBI5 128 aa24.82■■□□□ 1.56
SSU72-201ENST00000291386 NEUROD4Q9HD90 331 aa24.82■■□□□ 1.56
SSU72-201ENST00000291386 TIMMDC1Q9NPL8 285 aa24.82■■□□□ 1.56
SSU72-201ENST00000291386 NPFFR2Q9Y5X5 522 aa24.82■■□□□ 1.56
SSU72-201ENST00000291386 TTC36A6NLP5 189 aa24.81■■□□□ 1.56
SSU72-201ENST00000291386 EMC8O43402 210 aa24.81■■□□□ 1.56
SSU72-201ENST00000291386 SLC28A2O43868 658 aa24.81■■□□□ 1.56
SSU72-201ENST00000291386 ERN1O75460 977 aaKnown RBP24.81■■□□□ 1.56
SSU72-201ENST00000291386 IL12AP29459 219 aa24.81■■□□□ 1.56
SSU72-201ENST00000291386 PHC1P78364 1004 aa24.81■■□□□ 1.56
SSU72-201ENST00000291386 IRX1P78414 480 aaPredicted RBP24.81■■□□□ 1.56
SSU72-201ENST00000291386 NTRK2Q16620 822 aa24.81■■□□□ 1.56
SSU72-201ENST00000291386 ANXA8L1Q5VT79 327 aa24.81■■□□□ 1.56
SSU72-201ENST00000291386 OR4F3Q6IEY1 312 aa24.81■■□□□ 1.56
SSU72-201ENST00000291386 TMEM64Q6YI46 380 aa24.81■■□□□ 1.56
SSU72-201ENST00000291386 MDGA2Q7Z553 956 aa24.81■■□□□ 1.56
SSU72-201ENST00000291386 ZNF605Q86T29 641 aa24.81■■□□□ 1.56
SSU72-201ENST00000291386 HOXB13Q92826 284 aaPredicted RBP24.81■■□□□ 1.56
SSU72-201ENST00000291386 SNRNP40Q96DI7 357 aaKnown RBP24.81■■□□□ 1.56
SSU72-201ENST00000291386 HES7Q9BYE0 225 aa24.81■■□□□ 1.56
SSU72-201ENST00000291386 SH2D2AQ9NP31 389 aa24.81■■□□□ 1.56
SSU72-201ENST00000291386 MAP10Q9P2G4 905 aa24.81■■□□□ 1.56
SSU72-201ENST00000291386 EXPH5Q8NEV8 1989 aa24.81■■□□□ 1.56
SSU72-201ENST00000291386 CAPN14A8MX76 684 aa24.8■■□□□ 1.56
SSU72-201ENST00000291386 SLC22A3O75751 556 aa24.8■■□□□ 1.56
SSU72-201ENST00000291386 C6orf47O95873 294 aa24.8■■□□□ 1.56
SSU72-201ENST00000291386 CT45A8P0DMV1 189 aa24.8■■□□□ 1.56
SSU72-201ENST00000291386 CT45A9P0DMV2 189 aa24.8■■□□□ 1.56
SSU72-201ENST00000291386 EFNA1P20827 205 aaPredicted RBP24.8■■□□□ 1.56
SSU72-201ENST00000291386 TMED10P49755 219 aaKnown RBP24.8■■□□□ 1.56
SSU72-201ENST00000291386 MLLT10P55197 1068 aa24.8■■□□□ 1.56
SSU72-201ENST00000291386 CT45A2Q5DJT8 189 aa24.8■■□□□ 1.56
SSU72-201ENST00000291386 SPANXN4Q5MJ08 99 aa24.8■■□□□ 1.56
SSU72-201ENST00000291386 GALNTL5Q7Z4T8 443 aa24.8■■□□□ 1.56
SSU72-201ENST00000291386 PSD4Q8NDX1 1056 aa24.8■■□□□ 1.56
SSU72-201ENST00000291386 VPS37AQ8NEZ2 397 aa24.8■■□□□ 1.56
SSU72-201ENST00000291386 CPT1CQ8TCG5 803 aa24.8■■□□□ 1.56
SSU72-201ENST00000291386 LMF2Q9BU23 707 aaKnown RBP24.8■■□□□ 1.56
SSU72-201ENST00000291386 KLF13Q9Y2Y9 288 aaPredicted RBP24.8■■□□□ 1.56
SSU72-201ENST00000291386 COPG1Q9Y678 874 aaKnown RBP24.8■■□□□ 1.56
SSU72-201ENST00000291386 NUP214P35658 2090 aaPredicted RBP24.79■■□□□ 1.56
SSU72-201ENST00000291386 ZNF462Q96JM2 2506 aa24.79■■□□□ 1.56
SSU72-201ENST00000291386 GIMAP1-GIMAP5A0A087WTJ2 511 aa24.79■■□□□ 1.56
SSU72-201ENST00000291386 PRSS51A0A1B0GVH4 220 aa24.79■■□□□ 1.56
SSU72-201ENST00000291386 ASPDHA6ND91 283 aa24.79■■□□□ 1.56
SSU72-201ENST00000291386 RASAL1O95294 804 aa24.79■■□□□ 1.56
SSU72-201ENST00000291386 ABCD3P28288 659 aa24.79■■□□□ 1.56
SSU72-201ENST00000291386 NME5P56597 212 aa24.79■■□□□ 1.56
SSU72-201ENST00000291386 PRR5P85299 388 aa24.79■■□□□ 1.56
SSU72-201ENST00000291386 PSG6Q00889 435 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms