RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 ZNF229Q9UJW7 825 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 IKZF2Q9UKS7 526 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 BLOC1S6Q9UL45 172 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 ATG4BQ9Y4P1 393 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 hCG_2014768A0A024R1R8 64 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 PRSS51A0A1B0GVH4 220 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 SNTNA6NMZ2 147 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 H0YC42 278 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 POLR1CO15160 346 aaPredicted RBP7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 CHST10O43529 356 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 RDH16O75452 317 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 DLGAP3O95886 979 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 CTSBP07858 339 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 RAB40ALP0C0E4 278 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 IL1RNP18510 177 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 SPANXN4Q5MJ08 99 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 TTC23Q5W5X9 447 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 TMEM64Q6YI46 380 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 ZNF517Q6ZMY9 492 aaPredicted RBP7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 RTL4Q6ZR62 310 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 ASRGL1Q7L266 308 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 OR9I1Q8NGQ6 314 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 OR9A4Q8NGU2 314 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 ZNF675Q8TD23 568 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 BTBD10Q9BSF8 475 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 PRPF19Q9UMS4 504 aaKnown RBP7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 PCDHGA7Q9Y5G6 932 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 SPTBP11277 2137 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 PNMA8CA0A1B0GUJ8 204 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 ATP1B1P05026 303 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 RPS15P62841 145 aaKnown RBP7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 DCDP81605 110 aaKnown RBP7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 C16orf87Q6PH81 154 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 COX15Q7KZN9 410 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 RAB11FIP2Q7L804 512 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 DEFB107AQ8IZN7 70 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 TNIP2Q8NFZ5 429 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 FAM81AQ8TBF8 368 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 RADILQ96JH8 1075 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 OR52E6Q96RD3 313 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 CTRCQ99895 268 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 RPF2Q9H7B2 306 aaKnown RBP7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 SERHLQ9NQF3 203 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 SLC35C2Q9NQQ7 365 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 NTMQ9P121 344 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 UTS2RQ9UKP6 389 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 ACSL6Q9UKU0 697 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 VPS4AQ9UN37 437 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 CSPG4Q6UVK1 2322 aa7.91□□□□□ -1.14
PTPDC1-201ENST00000288976 TRBV5-3A0A0A0MS03 114 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 A0A0A6YYC8 382 aaPredicted RBP7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 I3L1I5 382 aaPredicted RBP7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 RFXANKO14593 260 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 CTNSO60931 367 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 KCNK5O95279 499 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 CPOXP36551 454 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 PWWP2BQ6NUJ5 590 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 C1orf94Q6P1W5 598 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 TMPRSS7Q7RTY8 843 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 ANKRD46Q86W74 232 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 OR51Q1Q8NH59 317 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 CAPSLQ8WWF8 208 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 GTF2H4Q92759 462 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 SH3YL1Q96HL8 342 aaPredicted RBP7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 KLRF1Q9NZS2 232 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 ABCD2Q9UBJ2 740 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 PISDQ9UG56 409 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 VSTM2BA6NLU5 285 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 OR10H3O60404 316 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 TPST2O60704 377 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 CBX6O95503 412 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 CSNK2A2P19784 350 aaPredicted RBP7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 PSPHP78330 225 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 SERTAD2Q14140 314 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 SPRED3Q2MJR0 410 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 VPS26BQ4G0F5 336 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 ZNF385BQ569K4 471 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 ADCK1Q86TW2 530 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 RCN3Q96D15 328 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 MMABQ96EY8 250 aaPredicted RBP7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 EGLN2Q96KS0 407 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 DHRS1Q96LJ7 313 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 TRNT1Q96Q11 434 aaKnown RBP7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 SPRY4Q9C004 299 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 TRIM4Q9C037 500 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 LANCL2Q9NS86 450 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 EXD2Q9NVH0 621 aa7.9□□□□□ -1.14
PTPDC1-201ENST00000288976 LINGO3P0C6S8 592 aa7.9□□□□□ -1.15
PTPDC1-201ENST00000288976 CLUP10909 449 aa7.9□□□□□ -1.15
PTPDC1-201ENST00000288976 LAMP1P11279 417 aa7.9□□□□□ -1.15
PTPDC1-201ENST00000288976 ABHD18Q0P651 414 aa7.9□□□□□ -1.15
PTPDC1-201ENST00000288976 CCNIQ14094 377 aa7.9□□□□□ -1.15
PTPDC1-201ENST00000288976 SHISA6Q6ZSJ9 500 aa7.9□□□□□ -1.15
PTPDC1-201ENST00000288976 GPR155Q7Z3F1 870 aa7.9□□□□□ -1.15
PTPDC1-201ENST00000288976 DHDDSQ86SQ9 333 aa7.9□□□□□ -1.15
PTPDC1-201ENST00000288976 TICAM1Q8IUC6 712 aa7.9□□□□□ -1.15
PTPDC1-201ENST00000288976 CHERPQ8IWX8 916 aaKnown RBP7.9□□□□□ -1.15
PTPDC1-201ENST00000288976 LRRC25Q8N386 305 aaPredicted RBP7.9□□□□□ -1.15
PTPDC1-201ENST00000288976 OR7A2PQ8NGA2 310 aa7.9□□□□□ -1.15
PTPDC1-201ENST00000288976 OR4K14Q8NGD5 310 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms