RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ARFRP1Q13795 201 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 IHHQ14623 411 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 RHOXF1Q8NHV9 184 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 RGMAQ96B86 450 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 CPNE2Q96FN4 548 aaPredicted RBP11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 C1QTNF7Q9BXJ2 289 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 LRRN3Q9H3W5 708 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 MAGIXQ9H6Y5 334 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 WDR26Q9H7D7 661 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 PRDM9Q9NQV7 894 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 SARDHQ9UL12 918 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 ANKRD34BA5PLL1 514 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 ZNF860A6NHJ4 632 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 WASH3PC4AMC7 463 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 XKRYO14609 159 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 ARPC5O15511 151 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 SPARCP09486 303 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 THEGLP0DJG4 465 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 MPC1LP0DKB6 136 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 CTSEP14091 401 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 PRR5P85299 388 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 CPZQ66K79 652 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 LRRTM4Q86VH4 590 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 ZNF740Q8NDX6 193 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 ZNF563Q8TA94 476 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 BCL7CQ8WUZ0 217 aaPredicted RBP11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 ASB11Q8WXH4 323 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 ASB15Q8WXK1 588 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 RERGQ96A58 199 aaPredicted RBP11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 RIPOR3Q96MK2 946 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 CPPED1Q9BRF8 314 aaPredicted RBP11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 NDC1Q9BTX1 674 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 AMBRA1Q9C0C7 1298 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 P2RX2Q9UBL9 471 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 PIM1P11309 404 aaPredicted RBP11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 RGS19P49795 217 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 DAPP51397 102 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 STXBP1P61764 594 aaKnown RBP11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 ACVR1Q04771 509 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 MAD2L1BPQ15013 274 aaPredicted RBP11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 ZNF367Q7RTV3 350 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 PTRH1Q86Y79 214 aaKnown RBP11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 UBQLNLQ8IYU4 475 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 OR10H5Q8NGA6 315 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 OR4E2Q8NGC2 313 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 ZNF514Q96K75 400 aaPredicted RBP11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 COMMD4Q9H0A8 199 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 PDFQ9HBH1 243 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 TAS2R16Q9NYV7 291 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 NINQ8N4C6 2090 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 TEX13CA0A0J9YWL9 993 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 PDCD5O14737 125 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 LYRM1O43325 122 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 PROS1P07225 676 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 SUOXP51687 545 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 E2F1Q01094 437 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 COL28A1Q2UY09 1125 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 C6orf120Q7Z4R8 191 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 TRAM1L1Q8N609 369 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 OR5AR1Q8NGP9 310 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 PIP5K1AQ99755 562 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 CARS2Q9HA77 564 aaKnown RBP11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 SLC25A37Q9NYZ2 338 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 MED31Q9Y3C7 131 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 CD8B2A6NJW9 211 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 FAM170BA6NMN3 283 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 SSX5O60225 188 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 PRMT3O60678 531 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 CD8BP10966 210 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 HMGA1P17096 107 aaKnown RBP11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 DCKP27707 260 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 PIN1Q13526 163 aaPredicted RBP11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 LEXMQ3ZCV2 418 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 AADACL4Q5VUY2 407 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 GAREM2Q75VX8 874 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 OR13F1Q8NGS4 319 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 OR8K3Q8NH51 312 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 BIN3Q9NQY0 253 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 GPR52Q9Y2T5 361 aa11.93□□□□□ -0.5
SLC6A1-201ENST00000287766 A0A1W2PQ09 198 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 SCGB1D2O95969 90 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 SOX2P48431 317 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 HBA1P69905 142 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 PRKCDQ05655 676 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 ILF3Q12906 894 aaKnown RBP eCLIP11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 PRSS48Q7RTY5 328 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 METTL4Q8N3J2 472 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 C16orf78Q8WTQ4 265 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 SMPDL3AQ92484 453 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 S100A16Q96FQ6 103 aaKnown RBP11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 TMEM202A6NGA9 273 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 POM121CA8CG34 1229 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 ANHXE9PGG2 379 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 FAM227AF5H4B4 570 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 FRS3O43559 492 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 SPDEFO95238 335 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 CTGFP29279 349 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 GABARAPL2P60520 117 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 TMEM44Q2T9K0 475 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms