RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 ATP6V1G2-DDX39BF2Z307 99 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 TGM5O43548 720 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 DCNP07585 359 aaKnown RBP8.35□□□□□ -1.07
NIPBL-201ENST00000282516 MBLAC2Q68D91 279 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 MAMDC2Q7Z304 686 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-201ENST00000282516 CELF5Q8N6W0 485 aaKnown RBP8.35□□□□□ -1.07
NIPBL-201ENST00000282516 PAPD5Q8NDF8 572 aaKnown RBP8.35□□□□□ -1.07
NIPBL-201ENST00000282516 TFGQ92734 400 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-201ENST00000282516 OSBPL2Q9H1P3 480 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 PRTFDC1Q9NRG1 225 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 PADI3Q9ULW8 664 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 AGAP14A8MT82 685 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 SOCS2O14508 198 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 CRYZL1O95825 349 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 EOMESO95936 686 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 PGCP20142 388 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 DDCP20711 480 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 STC1P52823 247 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 PRRT3Q5FWE3 981 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 SH3RF2Q8TEC5 729 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 LRCH3Q96II8 777 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 NUBP2Q9Y5Y2 271 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 TMEM225BP0DP42 221 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 G6PDP11413 515 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 SERPINF1P36955 418 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 PAPD4Q6PIY7 484 aaKnown RBP8.34□□□□□ -1.07
NIPBL-201ENST00000282516 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.34□□□□□ -1.07
NIPBL-201ENST00000282516 CILP2Q8IUL8 1156 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 ZDHHC14Q8IZN3 488 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 HOXD1Q9GZZ0 328 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 MAGIXQ9H6Y5 334 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 TCRBV7S2A1N4TA0A589 114 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 FOXO6A8MYZ6 492 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 UBBP0CG47 229 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 UBCP0CG48 685 aaKnown RBP8.34□□□□□ -1.07
NIPBL-201ENST00000282516 RPS27AP62979 156 aaKnown RBP8.34□□□□□ -1.07
NIPBL-201ENST00000282516 UBA52P62987 128 aaKnown RBP8.34□□□□□ -1.07
NIPBL-201ENST00000282516 SLC10A1Q14973 349 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 TMEM41BQ5BJD5 291 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 PRMT8Q9NR22 394 aaPredicted RBP8.34□□□□□ -1.07
NIPBL-201ENST00000282516 GLTPQ9NZD2 209 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 RHCGQ9UBD6 479 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 DUX1O43812 170 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 FAM189A1O60320 539 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 EBLN1P0CF75 366 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 GABRA3P34903 492 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 ARSIQ5FYB1 569 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 LRRC25Q8N386 305 aaPredicted RBP8.34□□□□□ -1.07
NIPBL-201ENST00000282516 OR2T4Q8NH00 348 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 MINDY3Q9H8M7 445 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 TEX10Q9NXF1 929 aaPredicted RBP8.34□□□□□ -1.07
NIPBL-201ENST00000282516 ADGRB1O14514 1584 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 SOBPA7XYQ1 873 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 BHLHE40O14503 412 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 ASGR2P07307 311 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 CD48P09326 243 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 ADORA3P0DMS8 318 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 CPT2P23786 658 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 RAB28P51157 221 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 DNAJB13P59910 316 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 EXOSC6Q5RKV6 272 aaKnown RBP8.34□□□□□ -1.07
NIPBL-201ENST00000282516 OR51T1Q8NGJ9 327 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 CNIH3Q8TBE1 160 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 SLC7A13Q8TCU3 470 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 BCL7BQ9BQE9 202 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 DTLQ9NZJ0 730 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 ANKRD26Q9UPS8 1709 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 HTRA2O43464 458 aaPredicted RBP8.34□□□□□ -1.07
NIPBL-201ENST00000282516 C8orf89P0DMQ9 161 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 AQP2P41181 271 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 TRMT10BQ6PF06 316 aaKnown RBP8.34□□□□□ -1.07
NIPBL-201ENST00000282516 ABHD15Q6UXT9 468 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 PIM3Q86V86 326 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 CHDHQ8NE62 594 aaPredicted RBP8.34□□□□□ -1.07
NIPBL-201ENST00000282516 OR6T1Q8NGN1 323 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 OR2T35Q8NGX2 323 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 ZNF436Q9C0F3 470 aaPredicted RBP8.34□□□□□ -1.07
NIPBL-201ENST00000282516 FBRSQ9HAH7 460 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 SAGE1Q9NXZ1 904 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 CA5BQ9Y2D0 317 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 OR5H15A6NDH6 313 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 OR51F1A6NGY5 319 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 OR5H14A6NHG9 310 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 OR5H1A6NKK0 313 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 ARVCFO00192 962 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 EMC8O43402 210 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 PNMTP11086 282 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 DAOAP59103 153 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 OR52E8Q6IFG1 317 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 GPR155Q7Z3F1 870 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 SYT14Q8NB59 555 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 OR8J1Q8NGP2 316 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 MSLNLQ96KJ4 702 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 SEMA6CQ9H3T2 930 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 CPNE6O95741 557 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 AKAIN1P0CW23 69 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 PNCKQ6P2M8 343 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 SLC22A25Q6T423 547 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 CCBE1Q6UXH8 406 aaPredicted RBP8.34□□□□□ -1.07
NIPBL-201ENST00000282516 MMABQ96EY8 250 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms