RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 PROZP22891 400 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 TUBG1P23258 451 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 CD40LGP29965 261 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 PRDX3P30048 256 aaKnown RBP10.9□□□□□ -0.66
USP53-201ENST00000274030 DUSP3P51452 185 aaPredicted RBP10.9□□□□□ -0.66
USP53-201ENST00000274030 TMBIM6P55061 237 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 PM20D1Q6GTS8 502 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 PIANPQ8IYJ0 282 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 STOML3Q8TAV4 291 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 SLC2A11Q9BYW1 496 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 ABCC6O95255 1503 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 YY2O15391 372 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 IL4RP24394 825 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 BMXP51813 675 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 RAB15P59190 212 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 ELOAQ14241 798 aaKnown RBP10.9□□□□□ -0.66
USP53-201ENST00000274030 ELP5Q8TE02 316 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 ABCG5Q9H222 651 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 PCDHB16Q9NRJ7 776 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 CNIH4Q9P003 139 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 RARRES3Q9UL19 164 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 VSTM2BA6NLU5 285 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 ZNF850A8MQ14 1090 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 SLC1A7O00341 560 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 CD3GP09693 182 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 CTBP2P56545 445 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 ZNF45Q02386 682 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 TMEM35AQ53FP2 167 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 SFRP4Q6FHJ7 346 aaPredicted RBP10.9□□□□□ -0.66
USP53-201ENST00000274030 NIPAL1Q6NVV3 410 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 TAS1R1Q7RTX1 841 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 SCML4Q8N228 414 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 ZNF420Q8TAQ5 688 aaPredicted RBP10.9□□□□□ -0.66
USP53-201ENST00000274030 NPIPA5A0A0B4J1W7 369 aa10.9□□□□□ -0.67
USP53-201ENST00000274030 NPIPA7E9PJI5 369 aa10.9□□□□□ -0.67
USP53-201ENST00000274030 NPIPA8P0DM63 369 aa10.9□□□□□ -0.67
USP53-201ENST00000274030 DPP6P42658 865 aa10.9□□□□□ -0.67
USP53-201ENST00000274030 FASLGP48023 281 aa10.9□□□□□ -0.67
USP53-201ENST00000274030 MS4A2Q01362 244 aa10.9□□□□□ -0.67
USP53-201ENST00000274030 LRIF1Q5T3J3 769 aa10.9□□□□□ -0.67
USP53-201ENST00000274030 LIPIQ6XZB0 460 aa10.9□□□□□ -0.67
USP53-201ENST00000274030 GPR26Q8NDV2 337 aa10.9□□□□□ -0.67
USP53-201ENST00000274030 C3orf58Q8NDZ4 430 aa10.9□□□□□ -0.67
USP53-201ENST00000274030 OR52N2Q8NGI0 321 aa10.9□□□□□ -0.67
USP53-201ENST00000274030 CD200R1Q8TD46 325 aa10.9□□□□□ -0.67
USP53-201ENST00000274030 ABHD5Q8WTS1 349 aa10.9□□□□□ -0.67
USP53-201ENST00000274030 FOXJ1Q92949 421 aa10.9□□□□□ -0.67
USP53-201ENST00000274030 KCNN1Q92952 543 aa10.9□□□□□ -0.67
USP53-201ENST00000274030 RADILQ96JH8 1075 aa10.9□□□□□ -0.67
USP53-201ENST00000274030 LMF1Q96S06 567 aa10.9□□□□□ -0.67
USP53-201ENST00000274030 FUNDC2Q9BWH2 189 aa10.9□□□□□ -0.67
USP53-201ENST00000274030 FN3KQ9H479 309 aa10.9□□□□□ -0.67
USP53-201ENST00000274030 CWH43Q9H720 699 aa10.9□□□□□ -0.67
USP53-201ENST00000274030 KCNN3Q9UGI6 736 aa10.9□□□□□ -0.67
USP53-201ENST00000274030 A0A1B0GVC2 190 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 SLC22A31A6NKX4 558 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 H3BML4 177 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 M0R129 80 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 ATE1O95260 518 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 MAOBP27338 520 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 RORAP35398 523 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 SOX3P41225 446 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 ETV4P43268 484 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 RIDAP52758 137 aaKnown RBP10.89□□□□□ -0.67
USP53-201ENST00000274030 CTXN1P60606 82 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 ACTC1P68032 377 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 ACTA1P68133 377 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 AAK1Q2M2I8 961 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 MTFR2Q6P444 385 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 MDGA1Q8NFP4 955 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 OR7G3Q8NG95 312 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 SLC12A9Q9BXP2 914 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 MKS1Q9NXB0 559 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 ANKRD26Q9UPS8 1709 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 A0A1B0GV50 99 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 F5H0A9 414 aaPredicted RBP10.89□□□□□ -0.67
USP53-201ENST00000274030 FBXO45P0C2W1 286 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 CTSAP10619 480 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 ANXA3P12429 323 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 CYBAP13498 195 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 AMY2BP19961 511 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 SFTPDP35247 375 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 MAP2K3P46734 347 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 MTNR1AP48039 350 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 HSD11B2P80365 405 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 HYAL4Q2M3T9 481 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 EEF1A1P5Q5VTE0 462 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 WDR53Q7Z5U6 358 aaPredicted RBP10.89□□□□□ -0.67
USP53-201ENST00000274030 KDM1BQ8NB78 822 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 RPLP0P6Q8NHW5 317 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 CNN2Q99439 309 aaKnown RBP10.89□□□□□ -0.67
USP53-201ENST00000274030 HCSTQ9UBK5 93 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 REV1Q9UBZ9 1251 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 RPH3AQ9Y2J0 694 aaPredicted RBP10.89□□□□□ -0.67
USP53-201ENST00000274030 KCNIP3Q9Y2W7 256 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 PARP4Q9UKK3 1724 aaKnown RBP10.89□□□□□ -0.67
USP53-201ENST00000274030 PPP6CO00743 305 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 SNNO75324 88 aaPredicted RBP10.89□□□□□ -0.67
USP53-201ENST00000274030 GJB3O75712 270 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 HNRNPKP61978 463 aaKnown RBP eCLIP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms