RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 C16orf62Q7Z3J2 963 aa15.67■□□□□ 0.1
VPS54-201ENST00000272322 KRT73Q86Y46 540 aa15.67■□□□□ 0.1
VPS54-201ENST00000272322 GATAD2AQ86YP4 633 aa15.67■□□□□ 0.1
VPS54-201ENST00000272322 LAX1Q8IWV1 398 aa15.67■□□□□ 0.1
VPS54-201ENST00000272322 ZBTB8BQ8NAP8 495 aaPredicted RBP15.67■□□□□ 0.1
VPS54-201ENST00000272322 FBXO15Q8NCQ5 510 aaPredicted RBP15.67■□□□□ 0.1
VPS54-201ENST00000272322 GPR151Q8TDV0 419 aa15.67■□□□□ 0.1
VPS54-201ENST00000272322 COX14Q96I36 57 aa15.67■□□□□ 0.1
VPS54-201ENST00000272322 SLC6A18Q96N87 628 aa15.67■□□□□ 0.1
VPS54-201ENST00000272322 SLC6A20Q9NP91 592 aa15.67■□□□□ 0.1
VPS54-201ENST00000272322 A4GNTQ9UNA3 340 aa15.67■□□□□ 0.1
VPS54-201ENST00000272322 UPK1BO75841 260 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 MED26O95402 600 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 HOXB6P17509 224 aaKnown RBP15.66■□□□□ 0.1
VPS54-201ENST00000272322 MAPK9P45984 424 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 PCBP4P57723 403 aaKnown RBP15.66■□□□□ 0.1
VPS54-201ENST00000272322 PPP2CBP62714 309 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 PPP2CAP67775 309 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 MLIPQ5VWP3 458 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 FCRLBQ6BAA4 426 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 FAM92BQ6ZTR7 304 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 SLC16A11Q8NCK7 471 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 KBTBD8Q8NFY9 601 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 LINC00615Q96LM1 132 aaPredicted RBP15.66■□□□□ 0.1
VPS54-201ENST00000272322 OPALINQ96PE5 141 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 RACGAP1Q9H0H5 632 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 FBXO8Q9NRD0 319 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 TBC1D29Q9UFV1 150 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 GNB5O14775 395 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 SLC2A10O95528 541 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 CSF2P04141 144 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 GKN3PP0CG01 181 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 CCBE1Q6UXH8 406 aaPredicted RBP15.66■□□□□ 0.1
VPS54-201ENST00000272322 KLHL6Q8WZ60 621 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 MENTQ9BUN1 341 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 SLC17A9Q9BYT1 436 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 MMP27Q9H306 513 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 TBC1D17Q9HA65 648 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 HHATLQ9HCP6 504 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 PALMDQ9NP74 551 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 APOBEC3BQ9UH17 382 aaKnown RBP15.66■□□□□ 0.1
VPS54-201ENST00000272322 ZC3H12DA2A288 527 aaKnown RBP15.66■□□□□ 0.1
VPS54-201ENST00000272322 OR2W5A6NFC9 320 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 RASGRP1O95267 797 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 HIST1H1TP22492 207 aaPredicted RBP15.66■□□□□ 0.1
VPS54-201ENST00000272322 SOX6P35712 828 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 ACTR1BP42025 376 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 ACTR1AP61163 376 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 CCDC85BQ15834 202 aaPredicted RBP15.66■□□□□ 0.1
VPS54-201ENST00000272322 TMEM52BQ4KMG9 183 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 NKAIN4Q8IVV8 208 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 FCGR1BQ92637 280 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 PBX4Q9BYU1 374 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 SLC9A8Q9Y2E8 581 aa15.66■□□□□ 0.1
VPS54-201ENST00000272322 FRYLO94915 3013 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 PRKNO60260 465 aaPredicted RBP15.65■□□□□ 0.1
VPS54-201ENST00000272322 LDB3O75112 727 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 KCNK2O95069 426 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 EPPINO95925 133 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 CEACAM5P06731 702 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 ETV5P41161 510 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 ETV1P50549 477 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 PRICKLE2Q7Z3G6 844 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 RAB42Q8N4Z0 105 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 OR4F15Q8NGB8 312 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 POP5Q969H6 163 aaKnown RBP15.65■□□□□ 0.1
VPS54-201ENST00000272322 MTERF3Q96E29 417 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 QRFPRQ96P65 431 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 NEDD4LQ96PU5 975 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 MUTYHQ9UIF7 546 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 ICKQ9UPZ9 632 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 CSNK1G3Q9Y6M4 447 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 CENPVL1A0A0U1RR11 272 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 POLR2CP19387 275 aaPredicted RBP15.65■□□□□ 0.1
VPS54-201ENST00000272322 RCVRNP35243 200 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 SOX18P35713 384 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 GIPRP48546 466 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 REEP5Q00765 189 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 HSDL2Q6YN16 418 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 IKBIPQ70UQ0 350 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 MTSS1LQ765P7 747 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 DMRTB1Q96MA1 342 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 BEX2Q9BXY8 128 aa15.65■□□□□ 0.1
VPS54-201ENST00000272322 THAP10Q9P2Z0 257 aaPredicted RBP15.65■□□□□ 0.1
VPS54-201ENST00000272322 ZNF106Q9H2Y7 1883 aaKnown RBP15.65■□□□□ 0.1
VPS54-201ENST00000272322 AQP9O43315 295 aa15.64■□□□□ 0.1
VPS54-201ENST00000272322 PSMA1P25786 263 aaKnown RBP15.64■□□□□ 0.1
VPS54-201ENST00000272322 TNFSF8P32971 234 aa15.64■□□□□ 0.1
VPS54-201ENST00000272322 LIMS1P48059 325 aa15.64■□□□□ 0.1
VPS54-201ENST00000272322 CSNK2BP67870 215 aa15.64■□□□□ 0.1
VPS54-201ENST00000272322 KIAA1324Q6UXG2 1013 aaKnown RBP15.64■□□□□ 0.1
VPS54-201ENST00000272322 HOMEZQ8IX15 550 aa15.64■□□□□ 0.1
VPS54-201ENST00000272322 TBC1D19Q8N5T2 526 aa15.64■□□□□ 0.1
VPS54-201ENST00000272322 NUP43Q8NFH3 380 aa15.64■□□□□ 0.1
VPS54-201ENST00000272322 CREB3L4Q8TEY5 395 aa15.64■□□□□ 0.1
VPS54-201ENST00000272322 MS4A6EQ96DS6 147 aa15.64■□□□□ 0.1
VPS54-201ENST00000272322 HDHD5Q9BXW7 423 aa15.64■□□□□ 0.1
VPS54-201ENST00000272322 PCDHGB6Q9Y5F9 930 aa15.64■□□□□ 0.1
VPS54-201ENST00000272322 A0A087WUU8 490 aa15.64■□□□□ 0.09
VPS54-201ENST00000272322 A0A1B0GVC2 190 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms