RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 CHI3L1P36222 383 aaPredicted RBP23.01■■□□□ 1.27
SSBP4-201ENST00000270061 CHRNB3Q05901 458 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 RBBP4Q09028 425 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 CEBPEQ15744 281 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 SFT2D3Q587I9 215 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 SAXO2Q658L1 398 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 ZFP28Q8NHY6 868 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 C9orf43Q8TAL5 461 aaPredicted RBP23.01■■□□□ 1.27
SSBP4-201ENST00000270061 ADAMTS17Q8TE56 1095 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 NEURL3Q96EH8 262 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 ABHD17AQ96GS6 310 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 AMDHD1Q96NU7 426 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 CHID1Q9BWS9 393 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 TMEM38AQ9H6F2 299 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 MAGIXQ9H6Y5 334 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 YY1AP1Q9H869 796 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 CUTCQ9NTM9 273 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 MS4A12Q9NXJ0 267 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 FITM1A5D6W6 292 aa23■■□□□ 1.27
SSBP4-201ENST00000270061 TXNDC9O14530 226 aa23■■□□□ 1.27
SSBP4-201ENST00000270061 NTSP30990 170 aa23■■□□□ 1.27
SSBP4-201ENST00000270061 PCGF2P35227 344 aa23■■□□□ 1.27
SSBP4-201ENST00000270061 SNRPNP63162 240 aaKnown RBP23■■□□□ 1.27
SSBP4-201ENST00000270061 FAM214AQ32MH5 1076 aa23■■□□□ 1.27
SSBP4-201ENST00000270061 C18orf63Q68DL7 685 aa23■■□□□ 1.27
SSBP4-201ENST00000270061 FAM180BQ6P0A1 224 aa23■■□□□ 1.27
SSBP4-201ENST00000270061 AMIGO2Q86SJ2 522 aa23■■□□□ 1.27
SSBP4-201ENST00000270061 APLFQ8IW19 511 aaPredicted RBP23■■□□□ 1.27
SSBP4-201ENST00000270061 ZCCHC10Q8TBK6 192 aa23■■□□□ 1.27
SSBP4-201ENST00000270061 CENPNQ96H22 339 aaPredicted RBP23■■□□□ 1.27
SSBP4-201ENST00000270061 RNF145Q96MT1 663 aa23■■□□□ 1.27
SSBP4-201ENST00000270061 SEPHS2Q99611 448 aa23■■□□□ 1.27
SSBP4-201ENST00000270061 GLIPR2Q9H4G4 154 aa23■■□□□ 1.27
SSBP4-201ENST00000270061 LYRM4Q9HD34 91 aa23■■□□□ 1.27
SSBP4-201ENST00000270061 PSME2Q9UL46 239 aa23■■□□□ 1.27
SSBP4-201ENST00000270061 FAF1Q9UNN5 650 aaPredicted RBP23■■□□□ 1.27
SSBP4-201ENST00000270061 DSCR3O14972 297 aa22.99■■□□□ 1.27
SSBP4-201ENST00000270061 KLF7O75840 302 aaPredicted RBP22.99■■□□□ 1.27
SSBP4-201ENST00000270061 SERPINA1P01009 418 aa22.99■■□□□ 1.27
SSBP4-201ENST00000270061 EIF2S1P05198 315 aaKnown RBP22.99■■□□□ 1.27
SSBP4-201ENST00000270061 KDELR2P33947 212 aa22.99■■□□□ 1.27
SSBP4-201ENST00000270061 SOAT1P35610 550 aa22.99■■□□□ 1.27
SSBP4-201ENST00000270061 BUD31P41223 144 aaPredicted RBP22.99■■□□□ 1.27
SSBP4-201ENST00000270061 CRATP43155 626 aa22.99■■□□□ 1.27
SSBP4-201ENST00000270061 TNFRSF17Q02223 184 aa22.99■■□□□ 1.27
SSBP4-201ENST00000270061 ATP6AP1Q15904 470 aa22.99■■□□□ 1.27
SSBP4-201ENST00000270061 DEFB134Q4QY38 66 aa22.99■■□□□ 1.27
SSBP4-201ENST00000270061 COX20Q5RI15 118 aa22.99■■□□□ 1.27
SSBP4-201ENST00000270061 C11orf65Q8NCR3 313 aa22.99■■□□□ 1.27
SSBP4-201ENST00000270061 SEMA6AQ9H2E6 1030 aa22.99■■□□□ 1.27
SSBP4-201ENST00000270061 DAPP1Q9UN19 280 aa22.99■■□□□ 1.27
SSBP4-201ENST00000270061 SAMD4AQ9UPU9 718 aaKnown RBP22.99■■□□□ 1.27
SSBP4-201ENST00000270061 HEMK1Q9Y5R4 338 aaPredicted RBP22.99■■□□□ 1.27
SSBP4-201ENST00000270061 RNF103-CHMP3A0A140T963 221 aa22.99■■□□□ 1.27
SSBP4-201ENST00000270061 MKRN2OSH3BPM6 223 aa22.99■■□□□ 1.27
SSBP4-201ENST00000270061 PRKRAO75569 313 aaKnown RBP22.99■■□□□ 1.27
SSBP4-201ENST00000270061 NR2F6P10588 404 aa22.99■■□□□ 1.27
SSBP4-201ENST00000270061 LIM2P55344 173 aa22.99■■□□□ 1.27
SSBP4-201ENST00000270061 RUNX2Q13950 521 aa22.99■■□□□ 1.27
SSBP4-201ENST00000270061 GCNT6Q5T4J0 391 aa22.99■■□□□ 1.27
SSBP4-201ENST00000270061 ARHGEF39Q8N4T4 335 aa22.99■■□□□ 1.27
SSBP4-201ENST00000270061 OR5AK3PQ8NH89 298 aa22.99■■□□□ 1.27
SSBP4-201ENST00000270061 FBXO30Q8TB52 745 aa22.99■■□□□ 1.27
SSBP4-201ENST00000270061 EME1Q96AY2 570 aa22.99■■□□□ 1.27
SSBP4-201ENST00000270061 BBS4Q96RK4 519 aa22.99■■□□□ 1.27
SSBP4-201ENST00000270061 H0YJX3 145 aa22.98■■□□□ 1.27
SSBP4-201ENST00000270061 PRKD3O94806 890 aa22.98■■□□□ 1.27
SSBP4-201ENST00000270061 NUDT7P0C024 238 aa22.98■■□□□ 1.27
SSBP4-201ENST00000270061 ETFAP13804 333 aa22.98■■□□□ 1.27
SSBP4-201ENST00000270061 HSPB3Q12988 150 aa22.98■■□□□ 1.27
SSBP4-201ENST00000270061 ENPP6Q6UWR7 440 aa22.98■■□□□ 1.27
SSBP4-201ENST00000270061 ANGPTL8Q6UXH0 198 aa22.98■■□□□ 1.27
SSBP4-201ENST00000270061 RNF130Q86XS8 419 aa22.98■■□□□ 1.27
SSBP4-201ENST00000270061 CNRIP1Q96F85 164 aaPredicted RBP22.98■■□□□ 1.27
SSBP4-201ENST00000270061 C10orf90Q96M02 699 aa22.98■■□□□ 1.27
SSBP4-201ENST00000270061 ZNF570Q96NI8 536 aa22.98■■□□□ 1.27
SSBP4-201ENST00000270061 NPLQ9BXD5 320 aaPredicted RBP22.98■■□□□ 1.27
SSBP4-201ENST00000270061 ZNF71Q9NQZ8 489 aaPredicted RBP22.98■■□□□ 1.27
SSBP4-201ENST00000270061 ENTPD4Q9Y227 616 aa22.98■■□□□ 1.27
SSBP4-201ENST00000270061 MRPS2Q9Y399 296 aaKnown RBP22.98■■□□□ 1.27
SSBP4-201ENST00000270061 PTRH2Q9Y3E5 179 aaKnown RBP22.98■■□□□ 1.27
SSBP4-201ENST00000270061 SNX8Q9Y5X2 465 aa22.98■■□□□ 1.27
SSBP4-201ENST00000270061 HYKKA2RU49 373 aa22.97■■□□□ 1.27
SSBP4-201ENST00000270061 ARGFXA6NJG6 315 aa22.97■■□□□ 1.27
SSBP4-201ENST00000270061 GLOD5A6NK44 160 aa22.97■■□□□ 1.27
SSBP4-201ENST00000270061 WASHC1A8K0Z3 465 aa22.97■■□□□ 1.27
SSBP4-201ENST00000270061 ZNF26P17031 533 aaPredicted RBP22.97■■□□□ 1.27
SSBP4-201ENST00000270061 CSNK2A2P19784 350 aaPredicted RBP22.97■■□□□ 1.27
SSBP4-201ENST00000270061 FOLR3P41439 243 aa22.97■■□□□ 1.27
SSBP4-201ENST00000270061 CDK9P50750 372 aaKnown RBP22.97■■□□□ 1.27
SSBP4-201ENST00000270061 PRTGQ2VWP7 1150 aa22.97■■□□□ 1.27
SSBP4-201ENST00000270061 MRPL14Q6P1L8 145 aaKnown RBP22.97■■□□□ 1.27
SSBP4-201ENST00000270061 TMEM64Q6YI46 380 aa22.97■■□□□ 1.27
SSBP4-201ENST00000270061 RAB43Q86YS6 212 aa22.97■■□□□ 1.27
SSBP4-201ENST00000270061 FAM86B1Q8N7N1 296 aa22.97■■□□□ 1.27
SSBP4-201ENST00000270061 SLC47A1Q96FL8 570 aa22.97■■□□□ 1.27
SSBP4-201ENST00000270061 PYURFQ96I23 114 aa22.97■■□□□ 1.27
SSBP4-201ENST00000270061 ZNF681Q96N22 645 aa22.97■■□□□ 1.27
SSBP4-201ENST00000270061 BTBD9Q96Q07 612 aa22.97■■□□□ 1.27
SSBP4-201ENST00000270061 VCXQ9H320 206 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms