RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 TOR2AQ5JU69 321 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 INTS11Q5TA45 600 aaKnown RBP13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 ZDHHC20Q5W0Z9 365 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 TRIM40Q6P9F5 258 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 TMEM64Q6YI46 380 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 PROSER1Q86XN7 944 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 CAMK1GQ96NX5 476 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 GAL3ST4Q96RP7 486 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 NTMT1Q9BV86 223 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 ATP13A2Q9NQ11 1180 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 CLCA3PQ9Y6N3 262 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 HEATR5BQ9P2D3 2071 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 CPED1A4D0V7 1026 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 PCDH17O14917 1159 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 HTR1AP08908 422 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 ICAM2P13598 275 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 CPN2P22792 545 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 MAZP56270 477 aaKnown RBP13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 DSTNP60981 165 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 KLHL12Q53G59 568 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 OR2T5Q6IEZ7 315 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 ARSKQ6UWY0 536 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 PRSS41Q7RTY9 318 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 MFSD2AQ8NA29 543 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 IL17RCQ8NAC3 791 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 OR9A2Q8NGT5 310 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 OR2T29Q8NH02 315 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 REPS1Q96D71 796 aa13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 TRIM45Q9H8W5 580 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF11A-201ENST00000269485 AKAP6Q13023 2319 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 LOC100130705A0A1B0GUX0 176 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 SLC1A7O00341 560 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 KLK8O60259 260 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 DNAJB6O75190 326 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 MATN4O95460 622 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 HSD17B1P14061 328 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 GGT1P19440 569 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 EVI2BP34910 448 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 DCTP40126 519 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 PI4KAP42356 2102 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 QPRTQ15274 297 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 DUSP7Q16829 419 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 FLYWCH1Q4VC44 716 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 C1orf189Q5VU69 101 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 ERICH5Q6P6B1 374 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 TMEM92Q6UXU6 159 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 GLCCI1Q86VQ1 547 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 CHDHQ8NE62 594 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 OR6C4Q8NGE1 309 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 TM9SF2Q99805 663 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 CLMPQ9H6B4 373 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 FAM118AQ9NWS6 357 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 NLGN3Q9NZ94 848 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 ZFR2Q9UPR6 939 aaKnown RBP13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 ANHXE9PGG2 379 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 TMPRSS11DO60235 418 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 PRMT3O60678 531 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 ERN1O75460 977 aaKnown RBP13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 PSIP1O75475 530 aaKnown RBP13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 GKN3PP0CG01 181 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 CBSLP0DN79 551 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 CBSP35520 551 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 MC3RP41968 323 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 CSNK1EP49674 416 aaKnown RBP13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 EXOC3L2Q2M3D2 409 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 PLET1Q6UQ28 207 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 NLRP8Q86W28 1048 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 ZNF548Q8NEK5 533 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 OR13H1Q8NG92 308 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 SMPDL3AQ92484 453 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 AHCYL2Q96HN2 611 aaKnown RBP13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 APOOQ9BUR5 198 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 AMBRA1Q9C0C7 1298 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 REEP4Q9H6H4 257 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 SLA2Q9H6Q3 261 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 DMRT3Q9NQL9 472 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 SNX7Q9UNH6 387 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 SPINT1O43278 529 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 POU3F3P20264 500 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 NTSP30990 170 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 TAS2R38P59533 333 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 EXOSC7Q15024 291 aaKnown RBP13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 CDC73Q6P1J9 531 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 SLC5A8Q8N695 610 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 ANKRD53Q8N9V6 530 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 AQP11Q8NBQ7 271 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 ATOH1Q92858 354 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 DNASE1L2Q92874 299 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 VMP1Q96GC9 406 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 ZNF222Q9UK12 451 aa13.36□□□□□ -0.27
TNFRSF11A-201ENST00000269485 DOCK7Q96N67 2140 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 SCN8AQ9UQD0 1980 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 PLXNA3P51805 1871 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 PLXNA4Q9HCM2 1894 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 PLPP1O14494 284 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 RGS13O14921 159 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 SCAMP2O15127 329 aaKnown RBP13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 RGS10O43665 173 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 PLOD3O60568 738 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 PTTG1O95997 202 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms