RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 C4orf46Q504U0 113 aa15.43■□□□□ 0.06
GPC1-201ENST00000264039 AGTRAPQ6RW13 159 aa15.43■□□□□ 0.06
GPC1-201ENST00000264039 OR8D4Q8NGM9 314 aa15.43■□□□□ 0.06
GPC1-201ENST00000264039 MARC2Q969Z3 335 aa15.43■□□□□ 0.06
GPC1-201ENST00000264039 CXorf58Q96LI9 332 aa15.43■□□□□ 0.06
GPC1-201ENST00000264039 HTATIP2Q9BUP3 242 aa15.43■□□□□ 0.06
GPC1-201ENST00000264039 NT5DC2Q9H857 520 aa15.43■□□□□ 0.06
GPC1-201ENST00000264039 ZCCHC3Q9NUD5 404 aaKnown RBP15.43■□□□□ 0.06
GPC1-201ENST00000264039 ACTR10Q9NZ32 417 aa15.43■□□□□ 0.06
GPC1-201ENST00000264039 NRAPQ86VF7 1730 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 SGCEO43556 437 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 TPOP07202 933 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 BMP7P18075 431 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 RPL17P18621 184 aaKnown RBP15.42■□□□□ 0.06
GPC1-201ENST00000264039 ALG1LQ6GMV1 187 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 FAAP20Q6NZ36 180 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 RFLNAQ6ZTI6 216 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 TMED4Q7Z7H5 227 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 OR11H7Q8NGC8 314 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 CPNE2Q96FN4 548 aaPredicted RBP15.42■□□□□ 0.06
GPC1-201ENST00000264039 MTG2Q9H4K7 406 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 TRAV20A0A0B4J274 112 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 OR10A3P58181 314 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 WDR5P61964 334 aaKnown RBP15.42■□□□□ 0.06
GPC1-201ENST00000264039 GLYR1Q49A26 553 aaPredicted RBP15.42■□□□□ 0.06
GPC1-201ENST00000264039 SFRP5Q5T4F7 317 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 SLC36A4Q6YBV0 504 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 AGMOQ6ZNB7 445 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 GTF3C2Q8WUA4 911 aaPredicted RBP15.42■□□□□ 0.06
GPC1-201ENST00000264039 FBLIM1Q8WUP2 373 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 RFKQ969G6 155 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 RELTQ969Z4 430 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 FBXL3Q9UKT7 428 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 RCE1Q9Y256 329 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 URB1O60287 2271 aaKnown RBP15.42■□□□□ 0.06
GPC1-201ENST00000264039 SLC19A2O60779 497 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 ATG12O94817 140 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 OR12D1P0DN82 309 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 RPS12P25398 132 aaKnown RBP15.42■□□□□ 0.06
GPC1-201ENST00000264039 SERPINA4P29622 427 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 IFNGR2P38484 337 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 SMAD3P84022 425 aaKnown RBP15.42■□□□□ 0.06
GPC1-201ENST00000264039 MC2RQ01718 297 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 GPC2Q8N158 579 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 ADAMTS19Q8TE59 1207 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 TADA1Q96BN2 335 aa15.42■□□□□ 0.06
GPC1-201ENST00000264039 FAM46AQ96IP4 442 aaKnown RBP15.42■□□□□ 0.06
GPC1-201ENST00000264039 OR6C75A6NL08 312 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 YY2O15391 372 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 GJB5O95377 273 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 CKMP06732 381 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 IL3P08700 152 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 CD79BP40259 229 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 MTAPQ13126 283 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 PLD1Q13393 1074 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 FCRLBQ6BAA4 426 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 LRRC70Q7Z2Q7 622 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 NXPE1Q8N323 547 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 TMEM163Q8TC26 289 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 RAD9AQ99638 391 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 TRMT61BQ9BVS5 477 aaKnown RBP15.41■□□□□ 0.06
GPC1-201ENST00000264039 REEP4Q9H6H4 257 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 RDH14Q9HBH5 336 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 GPN1Q9HCN4 374 aaPredicted RBP15.41■□□□□ 0.06
GPC1-201ENST00000264039 PADI3Q9ULW8 664 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 AK6Q9Y3D8 172 aaKnown RBP15.41■□□□□ 0.06
GPC1-201ENST00000264039 COL16A1Q07092 1604 aaPredicted RBP15.41■□□□□ 0.06
GPC1-201ENST00000264039 LRRN3E7EW58 273 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 KLK8O60259 260 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 RB1P06400 928 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 ADRA2AP08913 450 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 UPP1Q16831 310 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 LGALSLQ3ZCW2 172 aaPredicted RBP15.41■□□□□ 0.06
GPC1-201ENST00000264039 OR5D16Q8NGK9 328 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 MARVELD1Q9BSK0 173 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 ZNF471Q9BX82 626 aaPredicted RBP15.41■□□□□ 0.06
GPC1-201ENST00000264039 C1QTNF3Q9BXJ4 246 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 LRRN3Q9H3W5 708 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 TMEM185BQ9H7F4 350 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 DDX31Q9H8H2 851 aaKnown RBP15.41■□□□□ 0.06
GPC1-201ENST00000264039 CFAP97Q9P2B7 532 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 COL14A1Q05707 1796 aaKnown RBP15.41■□□□□ 0.06
GPC1-201ENST00000264039 AHRP35869 848 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 HMGCLP35914 325 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 GPR85P60893 370 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 DGCR2P98153 550 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 MFSD13AQ14CX5 517 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 ODF4Q2M2E3 257 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 PODNL1Q6PEZ8 512 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 TRILQ7L0X0 811 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 OR51L1Q8NGJ5 315 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 OR8S1Q8NH09 359 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 SMAP2Q8WU79 429 aaPredicted RBP15.41■□□□□ 0.06
GPC1-201ENST00000264039 UCN3Q969E3 161 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 TREM1Q9NP99 234 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 KLHL28Q9NXS3 571 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 EP400Q96L91 3159 aa15.41■□□□□ 0.06
GPC1-201ENST00000264039 ZAR1LA6NP61 321 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 TO15178 435 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 SAGP10523 405 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms