RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 EPHX1P07099 455 aa11.71□□□□□ -0.54
CHMP2B-201ENST00000263780 ZNF250P15622 560 aa11.71□□□□□ -0.54
CHMP2B-201ENST00000263780 MMP11P24347 488 aa11.71□□□□□ -0.54
CHMP2B-201ENST00000263780 MMP12P39900 470 aa11.71□□□□□ -0.54
CHMP2B-201ENST00000263780 FGFBP1Q14512 234 aa11.71□□□□□ -0.54
CHMP2B-201ENST00000263780 ASB18Q6ZVZ8 466 aa11.71□□□□□ -0.54
CHMP2B-201ENST00000263780 GET4Q7L5D6 327 aaPredicted RBP11.71□□□□□ -0.54
CHMP2B-201ENST00000263780 ZER1Q7Z7L7 766 aa11.71□□□□□ -0.54
CHMP2B-201ENST00000263780 MRGPREQ86SM8 312 aa11.71□□□□□ -0.54
CHMP2B-201ENST00000263780 GPAT4Q86UL3 456 aa11.71□□□□□ -0.54
CHMP2B-201ENST00000263780 HORMAD2Q8N7B1 307 aa11.71□□□□□ -0.54
CHMP2B-201ENST00000263780 ZNF485Q8NCK3 441 aa11.71□□□□□ -0.54
CHMP2B-201ENST00000263780 OR11H7Q8NGC8 314 aa11.71□□□□□ -0.54
CHMP2B-201ENST00000263780 SLC9A6Q92581 669 aa11.71□□□□□ -0.54
CHMP2B-201ENST00000263780 UBE2E3Q969T4 207 aa11.71□□□□□ -0.54
CHMP2B-201ENST00000263780 WDR34Q96EX3 536 aa11.71□□□□□ -0.54
CHMP2B-201ENST00000263780 SPATA5L1Q9BVQ7 753 aa11.71□□□□□ -0.54
CHMP2B-201ENST00000263780 ACTR6Q9GZN1 396 aa11.71□□□□□ -0.54
CHMP2B-201ENST00000263780 ZNF624Q9P2J8 865 aaPredicted RBP11.71□□□□□ -0.54
CHMP2B-201ENST00000263780 TEX13CA0A0J9YWL9 993 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 RPS10-NUDT3A0A1W2PQS6 291 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 CARNS1A5YM72 827 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 NCR1O76036 304 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 TPPPO94811 219 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 CELP19835 753 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 EXOSC2Q13868 293 aaKnown RBP11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 HBMQ6B0K9 141 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 ADNP2Q6IQ32 1131 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 PYHIN1Q6K0P9 492 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 SERPINA13PQ6UXR4 307 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 RTL4Q6ZR62 310 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 POGLUT1Q8NBL1 392 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 GNPDA2Q8TDQ7 276 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 ADAMTS14Q8WXS8 1223 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 ERMAPQ96PL5 475 aaPredicted RBP11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 TMEM121BQ9BXQ6 578 aaPredicted RBP11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 GSX2Q9BZM3 304 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 RNF32Q9H0A6 362 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 SERHL2Q9H4I8 314 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 SUV39H2Q9H5I1 410 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 CXorf36Q9H7Y0 433 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 NEUROD4Q9HD90 331 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 IMP3Q9NV31 184 aaKnown RBP11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 UCKL1Q9NWZ5 548 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 AHSPQ9NZD4 102 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 EMC3Q9P0I2 261 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 SCP2D1Q9UJQ7 156 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 A4GNTQ9UNA3 340 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 DNMT3AQ9Y6K1 912 aaPredicted RBP11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 RGS9O75916 674 aaPredicted RBP11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 GBAP04062 536 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 RB1P06400 928 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 KLK1P06870 262 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 C1GALT1C1LP0DN25 315 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 DNASE1P24855 282 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 IMPA1P29218 277 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 SOX9P48436 509 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 RNF144AP50876 292 aaPredicted RBP11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 ZNF81P51508 661 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 DCDC1P59894 354 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 BDH1Q02338 343 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 IDNKQ5T6J7 187 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 TNFAIP8L2Q6P589 184 aaPredicted RBP11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 RSPO2Q6UXX9 243 aaPredicted RBP11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 FGD2Q7Z6J4 655 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 WDR48Q8TAF3 677 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 NR4A3Q92570 626 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 RBPMSQ93062 196 aaKnown RBP11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 NEIL2Q969S2 332 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 C7orf50Q9BRJ6 194 aaKnown RBP11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 SLC6A16Q9GZN6 736 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 OSGEPL1Q9H4B0 414 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 ZNF275Q9NSD4 429 aaPredicted RBP11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 NUDT15Q9NV35 164 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 EVA1BQ9NVM1 165 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 PTGFRNQ9P2B2 879 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 PCDH10Q9P2E7 1040 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 KIF25Q9UIL4 384 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 SESN1Q9Y6P5 492 aa11.7□□□□□ -0.54
CHMP2B-201ENST00000263780 MEIKINA0A087WXM9 373 aa11.69□□□□□ -0.54
CHMP2B-201ENST00000263780 TRIM77I1YAP6 450 aa11.69□□□□□ -0.54
CHMP2B-201ENST00000263780 SEMA7AO75326 666 aa11.69□□□□□ -0.54
CHMP2B-201ENST00000263780 SLC16A8O95907 504 aa11.69□□□□□ -0.54
CHMP2B-201ENST00000263780 TGFB1P01137 390 aa11.69□□□□□ -0.54
CHMP2B-201ENST00000263780 TCRBP04435 133 aa11.69□□□□□ -0.54
CHMP2B-201ENST00000263780 IL3P08700 152 aa11.69□□□□□ -0.54
CHMP2B-201ENST00000263780 MANFP55145 182 aaKnown RBP11.69□□□□□ -0.54
CHMP2B-201ENST00000263780 SHC2P98077 582 aa11.69□□□□□ -0.54
CHMP2B-201ENST00000263780 SLBPQ14493 270 aaKnown RBP eCLIP11.69□□□□□ -0.54
CHMP2B-201ENST00000263780 TAF12Q16514 161 aa11.69□□□□□ -0.54
CHMP2B-201ENST00000263780 SPDYE7PQ495Y7 208 aa11.69□□□□□ -0.54
CHMP2B-201ENST00000263780 CCSAPQ6IQ19 270 aaPredicted RBP11.69□□□□□ -0.54
CHMP2B-201ENST00000263780 IQCHQ86VS3 1027 aa11.69□□□□□ -0.54
CHMP2B-201ENST00000263780 APCDD1Q8J025 514 aa11.69□□□□□ -0.54
CHMP2B-201ENST00000263780 ZFP41Q8N8Y5 198 aa11.69□□□□□ -0.54
CHMP2B-201ENST00000263780 SRFBP1Q8NEF9 429 aaKnown RBP11.69□□□□□ -0.54
CHMP2B-201ENST00000263780 ECHDC3Q96DC8 303 aa11.69□□□□□ -0.54
CHMP2B-201ENST00000263780 SAP130Q9H0E3 1048 aa11.69□□□□□ -0.54
CHMP2B-201ENST00000263780 MVB12BQ9H7P6 319 aa11.69□□□□□ -0.54
CHMP2B-201ENST00000263780 GLS2Q9UI32 602 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms