RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 OR13F1Q8NGS4 319 aa12.77□□□□□ -0.37
VMP1-201ENST00000262291 ZDHHC1Q8WTX9 485 aa12.77□□□□□ -0.37
VMP1-201ENST00000262291 SLC22A18Q96BI1 424 aa12.77□□□□□ -0.37
VMP1-201ENST00000262291 LRRC61Q9BV99 259 aa12.77□□□□□ -0.37
VMP1-201ENST00000262291 TAS2R7Q9NYW3 318 aa12.77□□□□□ -0.37
VMP1-201ENST00000262291 PSME2Q9UL46 239 aa12.77□□□□□ -0.37
VMP1-201ENST00000262291 TRBV4-1A0A0J9YWV2 114 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 GADD45GO95257 159 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 IFNA14P01570 189 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 ITGAMP11215 1152 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 TGM1P22735 817 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 ALDH4A1P30038 563 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 TTKP33981 857 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 MAP2K4P45985 399 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 XCR1P46094 333 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 UBE2IP63279 158 aaKnown RBP12.76□□□□□ -0.37
VMP1-201ENST00000262291 LSM11P83369 360 aaKnown RBP eCLIP12.76□□□□□ -0.37
VMP1-201ENST00000262291 LEXMQ3ZCV2 418 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 FAM111BQ6SJ93 734 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 TMEM52Q8NDY8 209 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 OR4C15Q8NGM1 316 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 HDAC2Q92769 488 aaKnown RBP12.76□□□□□ -0.37
VMP1-201ENST00000262291 GAL3ST3Q96A11 431 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 PIP5K1AQ99755 562 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 PCDHGA2Q9Y5H1 932 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 ENPP4Q9Y6X5 453 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 SPAG17Q6Q759 2223 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 ADAMDEC1O15204 470 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 IGFBP1P08833 259 aaPredicted RBP12.76□□□□□ -0.37
VMP1-201ENST00000262291 GLULP15104 373 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 ST6GAL1P15907 406 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 PTNP21246 168 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 POU1F1P28069 291 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 IDH2P48735 452 aaKnown RBP12.76□□□□□ -0.37
VMP1-201ENST00000262291 LSM3P62310 102 aaKnown RBP12.76□□□□□ -0.37
VMP1-201ENST00000262291 OCA2Q04671 838 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 RFX4Q33E94 735 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 SPARTQ8N0X7 666 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 NUP43Q8NFH3 380 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 PHF10Q8WUB8 498 aaKnown RBP12.76□□□□□ -0.37
VMP1-201ENST00000262291 PROX1Q92786 737 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 TBC1D20Q96BZ9 403 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 SARGQ9BW04 601 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 CAPN10Q9HC96 672 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 FBXL21Q9UKT6 434 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 ZNF780BQ9Y6R6 833 aa12.76□□□□□ -0.37
VMP1-201ENST00000262291 TRIM64BA6NI03 449 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 C2orf74A8MZ97 194 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 UGT2B11O75310 529 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 BUD31P41223 144 aaPredicted RBP12.75□□□□□ -0.37
VMP1-201ENST00000262291 CCR5P51681 352 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 XKP51811 444 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 HOXC5Q00444 222 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 FZD5Q13467 585 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 PIN1Q13526 163 aaPredicted RBP12.75□□□□□ -0.37
VMP1-201ENST00000262291 ZNF846Q147U1 533 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 BROXQ5VW32 411 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 XAF1Q6GPH4 301 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 PTCRAQ6ISU1 281 aaPredicted RBP12.75□□□□□ -0.37
VMP1-201ENST00000262291 TSPYL5Q86VY4 417 aaPredicted RBP12.75□□□□□ -0.37
VMP1-201ENST00000262291 PEX5LQ8IYB4 626 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 TAGAPQ8N103 731 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 SRFBP1Q8NEF9 429 aaKnown RBP12.75□□□□□ -0.37
VMP1-201ENST00000262291 OR7G2Q8NG99 324 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 LMX1AQ8TE12 382 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 POP5Q969H6 163 aaKnown RBP12.75□□□□□ -0.37
VMP1-201ENST00000262291 RERGQ96A58 199 aaPredicted RBP12.75□□□□□ -0.37
VMP1-201ENST00000262291 ARSGQ96EG1 525 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 ZNF681Q96N22 645 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 ZFYVE21Q9BQ24 234 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 PRO3102Q9H379 93 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 EHD3Q9NZN3 535 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 P2RX2Q9UBL9 471 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 PILRAQ9UKJ1 303 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 OR2W5A6NFC9 320 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 SGK494L7N484 410 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 PCDHGA12O60330 932 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 NDUFS2O75306 463 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 NUDT6P53370 316 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 COPZ1P61923 177 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 SEC23BQ15437 767 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 MICAQ29983 383 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 RBM48Q5RL73 367 aaKnown RBP12.75□□□□□ -0.37
VMP1-201ENST00000262291 CCDC81Q6ZN84 652 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 AVL9Q8NBF6 648 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 AQP11Q8NBQ7 271 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 ELP4Q96EB1 424 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 ZNF486Q96H40 463 aaPredicted RBP12.75□□□□□ -0.37
VMP1-201ENST00000262291 SLC2A4RGQ9NR83 387 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 KCMF1Q9P0J7 381 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 COLQQ9Y215 455 aaPredicted RBP12.75□□□□□ -0.37
VMP1-201ENST00000262291 INMTO95050 263 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 SOX14O95416 240 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 GASTP01350 101 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 MPIP34949 423 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 TMBIM6P55061 237 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 SHC2P98077 582 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 TGM3Q08188 693 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 CCDC58Q4VC31 144 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 FAM92BQ6ZTR7 304 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms