RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 LIMS3P0CW19 117 aa16.47■□□□□ 0.23
TRAM1-201ENST00000262213 LIMS4P0CW20 117 aa16.47■□□□□ 0.23
TRAM1-201ENST00000262213 ACP2P11117 423 aa16.47■□□□□ 0.23
TRAM1-201ENST00000262213 GAS1P54826 345 aa16.47■□□□□ 0.23
TRAM1-201ENST00000262213 CSTF1Q05048 431 aaKnown RBP16.47■□□□□ 0.23
TRAM1-201ENST00000262213 MRPL28Q13084 256 aaKnown RBP16.47■□□□□ 0.23
TRAM1-201ENST00000262213 TCEAL8Q8IYN2 117 aa16.47■□□□□ 0.23
TRAM1-201ENST00000262213 SLC37A3Q8NCC5 494 aa16.47■□□□□ 0.23
TRAM1-201ENST00000262213 ANKK1Q8NFD2 765 aa16.47■□□□□ 0.23
TRAM1-201ENST00000262213 OR5AR1Q8NGP9 310 aa16.47■□□□□ 0.23
TRAM1-201ENST00000262213 TEX47Q8TBZ9 253 aa16.47■□□□□ 0.23
TRAM1-201ENST00000262213 ATF6BQ99941 703 aa16.47■□□□□ 0.23
TRAM1-201ENST00000262213 MAN2C1Q9NTJ4 1040 aa16.47■□□□□ 0.23
TRAM1-201ENST00000262213 CUEDC1Q9NWM3 386 aaPredicted RBP16.47■□□□□ 0.23
TRAM1-201ENST00000262213 KLHL21Q9UJP4 597 aa16.47■□□□□ 0.23
TRAM1-201ENST00000262213 PPM1DO15297 605 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 PSMB5P28074 263 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 UQCRC1P31930 480 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 OR3A3P47888 321 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 LIPIQ6XZB0 460 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 SLC36A4Q6YBV0 504 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 IKBIPQ70UQ0 350 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 AMER3Q8N944 861 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 VN1R2Q8NFZ6 395 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 NEIL3Q8TAT5 605 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 KLK6Q92876 244 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 PHF21AQ96BD5 680 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 ICKQ9UPZ9 632 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 OBSL1O75147 1896 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 HCN1O60741 890 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 ARSBP15848 533 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 SDHBP21912 280 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 GABRA5P31644 462 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 ATP6V1E1P36543 226 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 RAB8AP61006 207 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 TPBGQ13641 420 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 IL20RBQ6UXL0 311 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 ADIPOR2Q86V24 386 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 TIGD4Q8IY51 512 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 OR8D4Q8NGM9 314 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 TMEM163Q8TC26 289 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 WDR34Q96EX3 536 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 SLC35G5Q96KT7 338 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 SMAD5Q99717 465 aaKnown RBP16.46■□□□□ 0.23
TRAM1-201ENST00000262213 FUZQ9BT04 418 aa16.46■□□□□ 0.23
TRAM1-201ENST00000262213 GSAPA4D1B5 854 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 STK25O00506 426 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 PRODHO43272 600 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 SEC14L5O43304 696 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 HRO43593 1189 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 TBX6O95947 436 aaPredicted RBP16.45■□□□□ 0.22
TRAM1-201ENST00000262213 C1QBP02746 253 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 TYRP14679 529 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 CDK5Q00535 292 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 RNLSQ5VYX0 342 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 RAET1GQ6H3X3 334 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 TBC1D19Q8N5T2 526 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 DNAJC5GQ8N7S2 189 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 RAET1EQ8TD07 263 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 ZNF689Q96CS4 500 aaPredicted RBP16.45■□□□□ 0.22
TRAM1-201ENST00000262213 ZCCHC3Q9NUD5 404 aaKnown RBP16.45■□□□□ 0.22
TRAM1-201ENST00000262213 AHSPQ9NZD4 102 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 P2RX2Q9UBL9 471 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 INMT-MINDY4F8WBC2 141 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 TMPRSS11DO60235 418 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 ABATP80404 500 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 SLC7A9P82251 487 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 KHDRBS2Q5VWX1 349 aaKnown RBP16.45■□□□□ 0.22
TRAM1-201ENST00000262213 LAMTOR1Q6IAA8 161 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 SLC30A6Q6NXT4 461 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 PRICKLE2Q7Z3G6 844 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 AMIGO1Q86WK6 493 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 LRRC56Q8IYG6 542 aaPredicted RBP16.45■□□□□ 0.22
TRAM1-201ENST00000262213 KRT78Q8N1N4 520 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 ANKRD53Q8N9V6 530 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 KIAA1143Q96AT1 154 aaPredicted RBP16.45■□□□□ 0.22
TRAM1-201ENST00000262213 CLIP3Q96DZ5 547 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 FAM46AQ96IP4 442 aaKnown RBP16.45■□□□□ 0.22
TRAM1-201ENST00000262213 TMEM43Q9BTV4 400 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 MED18Q9BUE0 208 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 HCFC1R1Q9NWW0 138 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 SLC23A1Q9UHI7 598 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 SLC9A8Q9Y2E8 581 aa16.45■□□□□ 0.22
TRAM1-201ENST00000262213 A0A1W2PRQ8 180 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 ORC5O43913 435 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 POP7O75817 140 aaKnown RBP16.44■□□□□ 0.22
TRAM1-201ENST00000262213 LRG1P02750 347 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 EVX1P49640 407 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 CDH11P55287 796 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 RRAS2P62070 204 aaPredicted RBP16.44■□□□□ 0.22
TRAM1-201ENST00000262213 RAB40BQ12829 278 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 IDNKQ5T6J7 187 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 SLC27A4Q6P1M0 643 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 DDX53Q86TM3 631 aaKnown RBP16.44■□□□□ 0.22
TRAM1-201ENST00000262213 PLCZ1Q86YW0 608 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 ZNF717Q9BY31 904 aaPredicted RBP16.44■□□□□ 0.22
TRAM1-201ENST00000262213 ACAD8Q9UKU7 415 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 NUMA1Q14980 2115 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 PLXNA2O75051 1894 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 TMEM129A0AVI4 362 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms