RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 PCDHGA7Q9Y5G6 932 aa25.69■■□□□ 1.7
SMARCD3-201ENST00000262188 C15orf38-AP3S2A0A0A6YYH1 394 aa25.68■■□□□ 1.7
SMARCD3-201ENST00000262188 LOC101059948A0A1B0GTJ6 334 aa25.68■■□□□ 1.7
SMARCD3-201ENST00000262188 NDUFB5O43674 189 aa25.68■■□□□ 1.7
SMARCD3-201ENST00000262188 TPPPO94811 219 aa25.68■■□□□ 1.7
SMARCD3-201ENST00000262188 TNFAIP8O95379 198 aa25.68■■□□□ 1.7
SMARCD3-201ENST00000262188 OXSR1O95747 527 aaPredicted RBP25.68■■□□□ 1.7
SMARCD3-201ENST00000262188 UMODP07911 640 aa25.68■■□□□ 1.7
SMARCD3-201ENST00000262188 MED25Q71SY5 747 aa25.68■■□□□ 1.7
SMARCD3-201ENST00000262188 ARPINQ7Z6K5 226 aa25.68■■□□□ 1.7
SMARCD3-201ENST00000262188 ESX1Q8N693 406 aa25.68■■□□□ 1.7
SMARCD3-201ENST00000262188 C8orf44Q96CB5 159 aa25.68■■□□□ 1.7
SMARCD3-201ENST00000262188 NRSN2Q9GZP1 204 aa25.68■■□□□ 1.7
SMARCD3-201ENST00000262188 IKZF5Q9H5V7 419 aa25.68■■□□□ 1.7
SMARCD3-201ENST00000262188 PCDHGB4Q9UN71 923 aa25.68■■□□□ 1.7
SMARCD3-201ENST00000262188 A0A096LPI6 279 aa25.67■■□□□ 1.7
SMARCD3-201ENST00000262188 EMP2P54851 167 aa25.67■■□□□ 1.7
SMARCD3-201ENST00000262188 TRMT12Q53H54 448 aaKnown RBP25.67■■□□□ 1.7
SMARCD3-201ENST00000262188 COQ5Q5HYK3 327 aa25.67■■□□□ 1.7
SMARCD3-201ENST00000262188 SZRD1Q7Z422 152 aa25.67■■□□□ 1.7
SMARCD3-201ENST00000262188 GMPR2Q9P2T1 348 aaKnown RBP25.67■■□□□ 1.7
SMARCD3-201ENST00000262188 NIPSNAP3AQ9UFN0 247 aaPredicted RBP25.67■■□□□ 1.7
SMARCD3-201ENST00000262188 MRPS18BQ9Y676 258 aaKnown RBP25.67■■□□□ 1.7
SMARCD3-201ENST00000262188 BLACEA4D250 179 aa25.67■■□□□ 1.7
SMARCD3-201ENST00000262188 CCDC160A6NGH7 325 aa25.67■■□□□ 1.7
SMARCD3-201ENST00000262188 SLC35E2P0CK97 266 aa25.67■■□□□ 1.7
SMARCD3-201ENST00000262188 STAT5AP42229 794 aa25.67■■□□□ 1.7
SMARCD3-201ENST00000262188 RABL3Q5HYI8 236 aa25.67■■□□□ 1.7
SMARCD3-201ENST00000262188 OR7G2Q8NG99 324 aa25.67■■□□□ 1.7
SMARCD3-201ENST00000262188 DGAT2Q96PD7 388 aa25.67■■□□□ 1.7
SMARCD3-201ENST00000262188 TCRBV16S1A1N1A0A5B0 115 aa25.66■■□□□ 1.7
SMARCD3-201ENST00000262188 DDX5P17844 614 aaKnown RBP25.66■■□□□ 1.7
SMARCD3-201ENST00000262188 DLSTP36957 453 aa25.66■■□□□ 1.7
SMARCD3-201ENST00000262188 MTPNP58546 118 aa25.66■■□□□ 1.7
SMARCD3-201ENST00000262188 LRIF1Q5T3J3 769 aa25.66■■□□□ 1.7
SMARCD3-201ENST00000262188 DEFB107AQ8IZN7 70 aa25.66■■□□□ 1.7
SMARCD3-201ENST00000262188 JADE3Q92613 823 aa25.66■■□□□ 1.7
SMARCD3-201ENST00000262188 NKD1Q969G9 470 aa25.66■■□□□ 1.7
SMARCD3-201ENST00000262188 RBM18Q96H35 190 aaKnown RBP25.66■■□□□ 1.7
SMARCD3-201ENST00000262188 WDR54Q9H977 334 aa25.66■■□□□ 1.7
SMARCD3-201ENST00000262188 TRBV5-3A0A0A0MS03 114 aa25.65■■□□□ 1.7
SMARCD3-201ENST00000262188 CASQ2O14958 399 aaPredicted RBP25.65■■□□□ 1.7
SMARCD3-201ENST00000262188 ALOX12BO75342 701 aa25.65■■□□□ 1.7
SMARCD3-201ENST00000262188 ATP1B1P05026 303 aa25.65■■□□□ 1.7
SMARCD3-201ENST00000262188 STT3AP46977 705 aa25.65■■□□□ 1.7
SMARCD3-201ENST00000262188 PGDP52209 483 aa25.65■■□□□ 1.7
SMARCD3-201ENST00000262188 MGAT2Q10469 447 aa25.65■■□□□ 1.7
SMARCD3-201ENST00000262188 RTP5Q14D33 572 aa25.65■■□□□ 1.7
SMARCD3-201ENST00000262188 PRICKLE4Q2TBC4 344 aa25.65■■□□□ 1.7
SMARCD3-201ENST00000262188 C10orf111Q8N326 155 aa25.65■■□□□ 1.7
SMARCD3-201ENST00000262188 PLPP5Q8NEB5 264 aa25.65■■□□□ 1.7
SMARCD3-201ENST00000262188 MAT2BQ9NZL9 334 aa25.65■■□□□ 1.7
SMARCD3-201ENST00000262188 SELENONQ9NZV5 590 aa25.65■■□□□ 1.7
SMARCD3-201ENST00000262188 ID4P47928 161 aa25.65■■□□□ 1.7
SMARCD3-201ENST00000262188 PRKAG1P54619 331 aa25.65■■□□□ 1.7
SMARCD3-201ENST00000262188 EXOSC7Q15024 291 aaKnown RBP25.65■■□□□ 1.7
SMARCD3-201ENST00000262188 ZNF628Q5EBL2 1059 aa25.65■■□□□ 1.7
SMARCD3-201ENST00000262188 CPZQ66K79 652 aa25.65■■□□□ 1.7
SMARCD3-201ENST00000262188 GOT1L1Q8NHS2 421 aaPredicted RBP25.65■■□□□ 1.7
SMARCD3-201ENST00000262188 BORCS5Q969J3 196 aa25.65■■□□□ 1.7
SMARCD3-201ENST00000262188 SLC35A5Q9BS91 424 aa25.65■■□□□ 1.7
SMARCD3-201ENST00000262188 S100A14Q9HCY8 104 aa25.65■■□□□ 1.7
SMARCD3-201ENST00000262188 VPS4AQ9UN37 437 aa25.65■■□□□ 1.7
SMARCD3-201ENST00000262188 TNNI3P19429 210 aa25.64■■□□□ 1.7
SMARCD3-201ENST00000262188 PSME3P61289 254 aa25.64■■□□□ 1.7
SMARCD3-201ENST00000262188 KCNC4Q03721 635 aa25.64■■□□□ 1.7
SMARCD3-201ENST00000262188 APOFQ13790 326 aa25.64■■□□□ 1.7
SMARCD3-201ENST00000262188 MLC1Q15049 377 aa25.64■■□□□ 1.7
SMARCD3-201ENST00000262188 NANOGP8Q6NSW7 305 aa25.64■■□□□ 1.7
SMARCD3-201ENST00000262188 ANKRD37Q7Z713 158 aa25.64■■□□□ 1.7
SMARCD3-201ENST00000262188 SAMD14Q8IZD0 417 aaPredicted RBP25.64■■□□□ 1.7
SMARCD3-201ENST00000262188 NATD1Q8N6N6 113 aa25.64■■□□□ 1.7
SMARCD3-201ENST00000262188 ZNF321PQ8N8H1 164 aa25.64■■□□□ 1.7
SMARCD3-201ENST00000262188 RIT1Q92963 219 aa25.64■■□□□ 1.7
SMARCD3-201ENST00000262188 ELP4Q96EB1 424 aa25.64■■□□□ 1.7
SMARCD3-201ENST00000262188 FAM120BQ96EK7 910 aaKnown RBP25.64■■□□□ 1.7
SMARCD3-201ENST00000262188 B3GNT4Q9C0J1 378 aa25.64■■□□□ 1.7
SMARCD3-201ENST00000262188 NANOGQ9H9S0 305 aa25.64■■□□□ 1.7
SMARCD3-201ENST00000262188 CXorf21Q9HAI6 301 aa25.64■■□□□ 1.7
SMARCD3-201ENST00000262188 GIN1Q9NXP7 522 aa25.64■■□□□ 1.7
SMARCD3-201ENST00000262188 RSL24D1Q9UHA3 163 aaKnown RBP25.64■■□□□ 1.7
SMARCD3-201ENST00000262188 ERN1O75460 977 aaKnown RBP25.64■■□□□ 1.69
SMARCD3-201ENST00000262188 CDH2P19022 906 aaPredicted RBP25.64■■□□□ 1.69
SMARCD3-201ENST00000262188 RPS26P62854 115 aaKnown RBP25.64■■□□□ 1.69
SMARCD3-201ENST00000262188 SRSF6Q13247 344 aaKnown RBP25.64■■□□□ 1.69
SMARCD3-201ENST00000262188 DNASE1L3Q13609 305 aa25.64■■□□□ 1.69
SMARCD3-201ENST00000262188 SPDYE7PQ495Y7 208 aa25.64■■□□□ 1.69
SMARCD3-201ENST00000262188 C8orf82Q6P1X6 216 aaPredicted RBP25.64■■□□□ 1.69
SMARCD3-201ENST00000262188 IL22RA1Q8N6P7 574 aa25.64■■□□□ 1.69
SMARCD3-201ENST00000262188 RNF148Q8N7C7 305 aa25.64■■□□□ 1.69
SMARCD3-201ENST00000262188 OR2Y1Q8NGV0 311 aa25.64■■□□□ 1.69
SMARCD3-201ENST00000262188 PTPMT1Q8WUK0 201 aaPredicted RBP25.64■■□□□ 1.69
SMARCD3-201ENST00000262188 ROPN1LQ96C74 230 aa25.64■■□□□ 1.69
SMARCD3-201ENST00000262188 OTUB1Q96FW1 271 aaPredicted RBP25.64■■□□□ 1.69
SMARCD3-201ENST00000262188 NEURL2Q9BR09 285 aa25.64■■□□□ 1.69
SMARCD3-201ENST00000262188 GPATCH1Q9BRR8 931 aaKnown RBP25.64■■□□□ 1.69
SMARCD3-201ENST00000262188 C1orf21Q9H246 121 aa25.64■■□□□ 1.69
SMARCD3-201ENST00000262188 PIF1Q9H611 641 aa25.64■■□□□ 1.69
SMARCD3-201ENST00000262188 THSD1Q9NS62 852 aa25.64■■□□□ 1.69
SMARCD3-201ENST00000262188 GID8Q9NWU2 228 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms