RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 CRELD1Q96HD1 420 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 FBXL20Q96IG2 436 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 CLPTM1LQ96KA5 538 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 CPPED1Q9BRF8 314 aaPredicted RBP19.25■□□□□ 0.67
RTCA-201ENST00000260563 TPT1P8Q9HAU6 139 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 MAT2BQ9NZL9 334 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 ERVK-19Q9WJR5 959 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.25■□□□□ 0.67
RTCA-201ENST00000260563 CLIC1O00299 241 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 NME4O00746 187 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 SLITRK5O94991 958 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 CELA2AP08217 269 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 CT62P0C5K7 136 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 NQO1P15559 274 aaKnown RBP19.25■□□□□ 0.67
RTCA-201ENST00000260563 ITGA3P26006 1051 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 Q0VFX4 171 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 ZNF267Q14586 743 aaPredicted RBP19.25■□□□□ 0.67
RTCA-201ENST00000260563 SPDYE7PQ495Y7 208 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 ZNF628Q5EBL2 1059 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 BORAQ6PGQ7 559 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 TMEM107Q6UX40 140 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 TMEM64Q6YI46 380 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 APLFQ8IW19 511 aaPredicted RBP19.25■□□□□ 0.67
RTCA-201ENST00000260563 VWA5B2Q8N398 1253 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 OR1N1Q8NGS0 311 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 OR5AK3PQ8NH89 298 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 DOK4Q8TEW6 326 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 APOBEC4Q8WW27 367 aaKnown RBP19.25■□□□□ 0.67
RTCA-201ENST00000260563 RAB3IPQ96QF0 476 aaPredicted RBP19.25■□□□□ 0.67
RTCA-201ENST00000260563 THUMPD3Q9BV44 507 aaKnown RBP19.25■□□□□ 0.67
RTCA-201ENST00000260563 IKZF5Q9H5V7 419 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 MMP25Q9NPA2 562 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 PPIEQ9UNP9 301 aaKnown RBP19.25■□□□□ 0.67
RTCA-201ENST00000260563 GMEB1Q9Y692 573 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 RNF103-CHMP3A0A140T963 221 aa19.24■□□□□ 0.67
RTCA-201ENST00000260563 DDAH2O95865 285 aa19.24■□□□□ 0.67
RTCA-201ENST00000260563 SERPINA7P05543 415 aa19.24■□□□□ 0.67
RTCA-201ENST00000260563 PPIBP23284 216 aaKnown RBP19.24■□□□□ 0.67
RTCA-201ENST00000260563 CHI3L1P36222 383 aaPredicted RBP19.24■□□□□ 0.67
RTCA-201ENST00000260563 CLCN2P51788 898 aa19.24■□□□□ 0.67
RTCA-201ENST00000260563 PIGGQ5H8A4 983 aa19.24■□□□□ 0.67
RTCA-201ENST00000260563 SAMD4BQ5PRF9 694 aaKnown RBP19.24■□□□□ 0.67
RTCA-201ENST00000260563 IRAK1BP1Q5VVH5 260 aa19.24■□□□□ 0.67
RTCA-201ENST00000260563 GPR155Q7Z3F1 870 aa19.24■□□□□ 0.67
RTCA-201ENST00000260563 ULK2Q8IYT8 1036 aa19.24■□□□□ 0.67
RTCA-201ENST00000260563 FBXW8Q8N3Y1 598 aa19.24■□□□□ 0.67
RTCA-201ENST00000260563 GALNT16Q8N428 558 aa19.24■□□□□ 0.67
RTCA-201ENST00000260563 APCDD1LQ8NCL9 501 aa19.24■□□□□ 0.67
RTCA-201ENST00000260563 ZNF721Q8TF20 911 aa19.24■□□□□ 0.67
RTCA-201ENST00000260563 UTP4Q969X6 686 aaKnown RBP19.24■□□□□ 0.67
RTCA-201ENST00000260563 ELP4Q96EB1 424 aa19.24■□□□□ 0.67
RTCA-201ENST00000260563 THOC3Q96J01 351 aaKnown RBP19.24■□□□□ 0.67
RTCA-201ENST00000260563 PRORYQ9H606 182 aa19.24■□□□□ 0.67
RTCA-201ENST00000260563 PACSIN3Q9UKS6 424 aa19.24■□□□□ 0.67
RTCA-201ENST00000260563 AP3M1Q9Y2T2 418 aa19.24■□□□□ 0.67
RTCA-201ENST00000260563 ZZEF1O43149 2961 aa19.23■□□□□ 0.67
RTCA-201ENST00000260563 NUP214P35658 2090 aaPredicted RBP19.23■□□□□ 0.67
RTCA-201ENST00000260563 EVPLLA8MZ36 301 aa19.23■□□□□ 0.67
RTCA-201ENST00000260563 HRKO00198 91 aa19.23■□□□□ 0.67
RTCA-201ENST00000260563 PDE5AO76074 875 aa19.23■□□□□ 0.67
RTCA-201ENST00000260563 C1QCP02747 245 aa19.23■□□□□ 0.67
RTCA-201ENST00000260563 ITGB2P05107 769 aa19.23■□□□□ 0.67
RTCA-201ENST00000260563 MC3RP41968 323 aa19.23■□□□□ 0.67
RTCA-201ENST00000260563 CCT3P49368 545 aaKnown RBP19.23■□□□□ 0.67
RTCA-201ENST00000260563 GPR143P51810 404 aa19.23■□□□□ 0.67
RTCA-201ENST00000260563 MRPS35P82673 323 aaKnown RBP19.23■□□□□ 0.67
RTCA-201ENST00000260563 MAP4K2Q12851 820 aa19.23■□□□□ 0.67
RTCA-201ENST00000260563 C19orf48Q6RUI8 117 aa19.23■□□□□ 0.67
RTCA-201ENST00000260563 FAM111BQ6SJ93 734 aa19.23■□□□□ 0.67
RTCA-201ENST00000260563 RNF148Q8N7C7 305 aa19.23■□□□□ 0.67
RTCA-201ENST00000260563 AMER2Q8N7J2 671 aa19.23■□□□□ 0.67
RTCA-201ENST00000260563 ZNF321PQ8N8H1 164 aa19.23■□□□□ 0.67
RTCA-201ENST00000260563 PNPT1Q8TCS8 783 aaKnown RBP19.23■□□□□ 0.67
RTCA-201ENST00000260563 SFXN5Q8TD22 340 aa19.23■□□□□ 0.67
RTCA-201ENST00000260563 ELP5Q8TE02 316 aa19.23■□□□□ 0.67
RTCA-201ENST00000260563 KAT2AQ92830 837 aa19.23■□□□□ 0.67
RTCA-201ENST00000260563 MOAP1Q96BY2 351 aa19.23■□□□□ 0.67
RTCA-201ENST00000260563 FAM120BQ96EK7 910 aaKnown RBP19.23■□□□□ 0.67
RTCA-201ENST00000260563 SENP5Q96HI0 755 aaPredicted RBP19.23■□□□□ 0.67
RTCA-201ENST00000260563 CORO2BQ9UQ03 480 aa19.23■□□□□ 0.67
RTCA-201ENST00000260563 USP24Q9UPU5 2620 aa19.23■□□□□ 0.67
RTCA-201ENST00000260563 TRBV11-1A0A0K0K1C0 115 aa19.22■□□□□ 0.67
RTCA-201ENST00000260563 PRORSD1PA6NEY8 169 aa19.22■□□□□ 0.67
RTCA-201ENST00000260563 PLOD2O00469 737 aa19.22■□□□□ 0.67
RTCA-201ENST00000260563 DNAJB5O75953 348 aa19.22■□□□□ 0.67
RTCA-201ENST00000260563 KRT75O95678 551 aa19.22■□□□□ 0.67
RTCA-201ENST00000260563 IGKV3-11P04433 115 aa19.22■□□□□ 0.67
RTCA-201ENST00000260563 ITGAMP11215 1152 aa19.22■□□□□ 0.67
RTCA-201ENST00000260563 EEFSECP57772 596 aaKnown RBP19.22■□□□□ 0.67
RTCA-201ENST00000260563 MGAT2Q10469 447 aa19.22■□□□□ 0.67
RTCA-201ENST00000260563 CEACAM7Q14002 265 aa19.22■□□□□ 0.67
RTCA-201ENST00000260563 COL28A1Q2UY09 1125 aa19.22■□□□□ 0.67
RTCA-201ENST00000260563 PGM2L1Q6PCE3 622 aa19.22■□□□□ 0.67
RTCA-201ENST00000260563 ANGPTL8Q6UXH0 198 aa19.22■□□□□ 0.67
RTCA-201ENST00000260563 RNF111Q6ZNA4 994 aa19.22■□□□□ 0.67
RTCA-201ENST00000260563 CTHRC1Q96CG8 243 aa19.22■□□□□ 0.67
RTCA-201ENST00000260563 MAGED4Q96JG8 741 aa19.22■□□□□ 0.67
RTCA-201ENST00000260563 ECSITQ9BQ95 431 aa19.22■□□□□ 0.67
RTCA-201ENST00000260563 SEMA4CQ9C0C4 833 aa19.22■□□□□ 0.67
RTCA-201ENST00000260563 LHPPQ9H008 270 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms