RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 BEND4Q6ZU67 534 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 OTOP2Q7RTS6 562 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 ZNF565Q8N9K5 539 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 ADAMTS16Q8TE57 1224 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 C2orf15Q8WU43 125 aaKnown RBP9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 SCAMP4Q969E2 229 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 FAM46AQ96IP4 442 aaKnown RBP9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 NECAB3Q96P71 396 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 C16orf70Q9BSU1 422 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 NMNAT1Q9HAN9 279 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 KCNK12Q9HB15 430 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 GRHPRQ9UBQ7 328 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 LCMT2O60294 686 aaKnown RBP9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 WDPCPO95876 746 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 TRAM1Q15629 374 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 ESCO2Q56NI9 601 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 GPR157Q5UAW9 335 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 PLBD1Q6P4A8 553 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 NLGN2Q8NFZ4 835 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 FABP7O15540 132 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 TNFSF12O43508 249 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 GSRP00390 522 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 MAGEA3P43357 314 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 LAX1Q8IWV1 398 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 UMODL1-AS1Q8N2C9 162 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 ACBD7Q8N6N7 88 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 TMEM102Q8N9M5 508 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 SGCDQ92629 289 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 NT5C3BQ969T7 300 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 JSRP1Q96MG2 331 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 SMG9Q9H0W8 520 aaKnown RBP9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 SRMSQ9H3Y6 488 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 YIPF1Q9Y548 306 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 UNC119BA6NIH7 251 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 TSTD3H0UI37 97 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 H7C417 338 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 MUSKO15146 869 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 BPNT1O95861 308 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 MFSD13AQ14CX5 517 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 GLT8D1Q68CQ7 371 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 FCRLBQ6BAA4 426 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 Q6ZPB1 254 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 SNIP1Q8TAD8 396 aaKnown RBP9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 METTL17Q9H7H0 456 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 TMEM98Q9Y2Y6 226 aa9.29□□□□□ -0.92
CTDSPL2-201ENST00000260327 SCO1O75880 301 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 UCHL1P09936 223 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 AK4P27144 223 aaPredicted RBP9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 TAGLNQ01995 201 aaKnown RBP9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 RPS26P11Q5JNZ5 115 aaPredicted RBP9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 PLAG1Q6DJT9 500 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 Q6ZVL8 140 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 OR56A3Q8NH54 315 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 SLC22A17Q8WUG5 538 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 LMF1Q96S06 567 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 PBDC1Q9BVG4 233 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 ARHGAP39Q9C0H5 1083 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 RDH14Q9HBH5 336 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 AK6Q9Y3D8 172 aaKnown RBP9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 PRAMEF2O60811 474 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 OR8U9P0C7N5 309 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 PFKLP17858 780 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 LAG3P18627 525 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 CERS1P27544 350 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 MECP2P51608 486 aaKnown RBP9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 WNT4P56705 351 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 NRG3P56975 720 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 MCCD1P59942 119 aaPredicted RBP9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 SCAPQ12770 1279 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 APOFQ13790 326 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 MICAQ29983 383 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 COQ5Q5HYK3 327 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 SPRYD7Q5W111 196 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 TMEM205Q6UW68 189 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 CCDC116Q8IYX3 515 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 OR13F1Q8NGS4 319 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 SLC35B4Q969S0 331 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 BOCQ9BWV1 1114 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 SLAMF8Q9P0V8 285 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 LOC285095A0A1B0GVY8 99 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 MTMR11A4FU01 709 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 MEIS3P2A8K0S8 358 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 POLR1CO15160 346 aaPredicted RBP9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 NAT1P18440 290 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 POLR2IP36954 125 aaKnown RBP9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 FRKP42685 505 aaPredicted RBP9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 ERVFC1P60507 584 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 GRIK2Q13002 908 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 IRF5Q13568 498 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 NUMA1Q14980 2115 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 CHRFAM7AQ494W8 412 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 ALG10Q5BKT4 473 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 RANBP10Q6VN20 620 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 LARP4Q71RC2 724 aaKnown RBP eCLIP9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 C3orf49Q96BT1 292 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 PSKH2Q96QS6 385 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 PRRG4Q9BZD6 226 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 VAPAQ9P0L0 249 aa9.28□□□□□ -0.92
CTDSPL2-201ENST00000260327 B4GALT6Q9UBX8 382 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms