RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 CLIC1O00299 241 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 PEX12O00623 359 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 COQ9O75208 318 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 BCAS2O75934 225 aaPredicted RBP14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 HMGN2P05204 90 aaKnown RBP14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 SLC6A2P23975 617 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 MTPNP58546 118 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 Q0VFX4 171 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 LASP1Q14847 261 aaKnown RBP14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 EXT1Q16394 746 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 RABL3Q5HYI8 236 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 BHLHB9Q6PI77 547 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 RNF111Q6ZNA4 994 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 GPR155Q7Z3F1 870 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 WDR53Q7Z5U6 358 aaPredicted RBP14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 C9orf40Q8IXQ3 194 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 SLC7A6OSQ96CW6 309 aaPredicted RBP14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 VMP1Q96GC9 406 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 C16orf58Q96GQ5 468 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 VPS50Q96JG6 964 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 DCBLD2Q96PD2 775 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 SERHL2Q9H4I8 314 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 TAS2R1Q9NYW7 299 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 RAXQ9Y2V3 346 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 GMEB1Q9Y692 573 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 URB1O60287 2271 aaKnown RBP14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 PRKNO60260 465 aaPredicted RBP14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 CDC20Q12834 499 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 CRTC2Q53ET0 693 aaPredicted RBP14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 DCAF10Q5QP82 559 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 COX20Q5RI15 118 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 MFSD12Q6NUT3 480 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 ANGPTL8Q6UXH0 198 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 CCDC121Q6ZUS5 278 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 RNF130Q86XS8 419 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 C10orf111Q8N326 155 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 FBXO30Q8TB52 745 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 M1APQ8TC57 530 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 ELP5Q8TE02 316 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 OTUB1Q96FW1 271 aaPredicted RBP14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 SLC35G5Q96KT7 338 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 VSTM2LQ96N03 204 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 HOPXQ9BPY8 73 aaPredicted RBP14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 YIPF4Q9BSR8 244 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 FOLH1BQ9HBA9 442 aa14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 HEMK1Q9Y5R4 338 aaPredicted RBP14.68□□□□□ -0.06
CCDC90B-201ENST00000260054 TRBV11-1A0A0K0K1C0 115 aa14.67□□□□□ -0.06
CCDC90B-201ENST00000260054 RRP8O43159 456 aaKnown RBP14.67□□□□□ -0.06
CCDC90B-201ENST00000260054 CLCN2P51788 898 aa14.67□□□□□ -0.06
CCDC90B-201ENST00000260054 PSME3P61289 254 aa14.67□□□□□ -0.06
CCDC90B-201ENST00000260054 VAC14Q08AM6 782 aa14.67□□□□□ -0.06
CCDC90B-201ENST00000260054 EBPQ15125 230 aaKnown RBP14.67□□□□□ -0.06
CCDC90B-201ENST00000260054 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.67□□□□□ -0.06
CCDC90B-201ENST00000260054 PGAM4Q8N0Y7 254 aa14.67□□□□□ -0.06
CCDC90B-201ENST00000260054 OR8J3Q8NGG0 315 aa14.67□□□□□ -0.06
CCDC90B-201ENST00000260054 OR52N2Q8NGI0 321 aa14.67□□□□□ -0.06
CCDC90B-201ENST00000260054 THAP4Q8WY91 577 aa14.67□□□□□ -0.06
CCDC90B-201ENST00000260054 ITPAQ9BY32 194 aa14.67□□□□□ -0.06
CCDC90B-201ENST00000260054 MMP25Q9NPA2 562 aa14.67□□□□□ -0.06
CCDC90B-201ENST00000260054 CHD8Q9HCK8 2581 aa14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 OR6C76A6NM76 312 aa14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 TAF4O00268 1085 aa14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 KRT75O95678 551 aa14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 GPX2P18283 190 aa14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 MATN1P21941 496 aa14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 MAN2A2P49641 1150 aa14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 RNF4P78317 190 aa14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 TLE3Q04726 772 aa14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 ZNF155Q12901 538 aaPredicted RBP14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 MYBPC3Q14896 1274 aa14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 RGNQ15493 299 aa14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 EXOSC6Q5RKV6 272 aaKnown RBP14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 TNFAIP8L2Q6P589 184 aaPredicted RBP14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 C16orf89Q6UX73 402 aa14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 HSDL2Q6YN16 418 aa14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 SLC15A3Q8IY34 581 aa14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 DEFB107AQ8IZN7 70 aa14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 HORMAD2Q8N7B1 307 aa14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 SLC16A11Q8NCK7 471 aa14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 OR5D16Q8NGK9 328 aa14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 TMEM125Q96AQ2 219 aa14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 THUMPD3Q9BV44 507 aaKnown RBP14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 ACTRT3Q9BYD9 372 aa14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 C1orf21Q9H246 121 aa14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 CMTM6Q9NX76 183 aa14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 PRODH2Q9UF12 536 aa14.66□□□□□ -0.06
CCDC90B-201ENST00000260054 EVPLLA8MZ36 301 aa14.65□□□□□ -0.06
CCDC90B-201ENST00000260054 ATP5HO75947 161 aa14.65□□□□□ -0.06
CCDC90B-201ENST00000260054 ACP2P11117 423 aa14.65□□□□□ -0.06
CCDC90B-201ENST00000260054 ITGAMP11215 1152 aa14.65□□□□□ -0.06
CCDC90B-201ENST00000260054 ICAM2P13598 275 aa14.65□□□□□ -0.06
CCDC90B-201ENST00000260054 PPIBP23284 216 aaKnown RBP14.65□□□□□ -0.06
CCDC90B-201ENST00000260054 MAP3K8P41279 467 aa14.65□□□□□ -0.06
CCDC90B-201ENST00000260054 CRATP43155 626 aa14.65□□□□□ -0.06
CCDC90B-201ENST00000260054 PRIM2P49643 509 aa14.65□□□□□ -0.06
CCDC90B-201ENST00000260054 SLC7A2P52569 658 aa14.65□□□□□ -0.06
CCDC90B-201ENST00000260054 PSG6Q00889 435 aa14.65□□□□□ -0.06
CCDC90B-201ENST00000260054 PROSER1Q86XN7 944 aa14.65□□□□□ -0.06
CCDC90B-201ENST00000260054 CDRT4Q8N9R6 151 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms