RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 PCBP3P57721 371 aaKnown RBP16.33■□□□□ 0.2
SRSF1-201ENST00000258962 GRM7Q14831 915 aa16.33■□□□□ 0.2
SRSF1-201ENST00000258962 MYBPC3Q14896 1274 aa16.33■□□□□ 0.2
SRSF1-201ENST00000258962 NIPAL1Q6NVV3 410 aa16.33■□□□□ 0.2
SRSF1-201ENST00000258962 ZC3H7AQ8IWR0 971 aaKnown RBP16.33■□□□□ 0.2
SRSF1-201ENST00000258962 OR56A1Q8NGH5 318 aa16.33■□□□□ 0.2
SRSF1-201ENST00000258962 OR1L3Q8NH93 324 aa16.33■□□□□ 0.2
SRSF1-201ENST00000258962 TANKQ92844 425 aa16.33■□□□□ 0.2
SRSF1-201ENST00000258962 RAB8BQ92930 207 aa16.33■□□□□ 0.2
SRSF1-201ENST00000258962 ANKRD9Q96BM1 317 aaPredicted RBP16.33■□□□□ 0.2
SRSF1-201ENST00000258962 OR51I1Q9H343 314 aa16.33■□□□□ 0.2
SRSF1-201ENST00000258962 COQ10BQ9H8M1 238 aa16.33■□□□□ 0.2
SRSF1-201ENST00000258962 NTN4Q9HB63 628 aa16.33■□□□□ 0.2
SRSF1-201ENST00000258962 FGF21Q9NSA1 209 aa16.33■□□□□ 0.2
SRSF1-201ENST00000258962 TMEM184BQ9Y519 407 aaPredicted RBP16.33■□□□□ 0.2
SRSF1-201ENST00000258962 MYOCOSA0A1B0GUC4 107 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 PRAMEF27A3QJZ7 478 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.32■□□□□ 0.2
SRSF1-201ENST00000258962 UPK1AO00322 258 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 CLOCKO15516 846 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 OR2B3O76000 313 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 PRSS23O95084 383 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 GPR75O95800 540 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 TFPTP0C1Z6 253 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 FGF5P12034 268 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 PORP16435 677 aaPredicted RBP16.32■□□□□ 0.2
SRSF1-201ENST00000258962 MAGEA2P43356 314 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 PRKAG1P54619 331 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 SKP1P63208 163 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 MAT1AQ00266 395 aaKnown RBP16.32■□□□□ 0.2
SRSF1-201ENST00000258962 TLE3Q04726 772 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 CLN3Q13286 438 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 SYT16Q17RD7 645 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 CYBRD1Q53TN4 286 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 C19orf48Q6RUI8 117 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 FAM111BQ6SJ93 734 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 VTCN1Q7Z7D3 282 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 METTL27Q8N6F8 245 aaPredicted RBP16.32■□□□□ 0.2
SRSF1-201ENST00000258962 OR7G2Q8NG99 324 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 OR5D16Q8NGK9 328 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 SLC38A5Q8WUX1 472 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 TAMM41Q96BW9 452 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 HSH2DQ96JZ2 352 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 SLC29A1Q99808 456 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 RBCK1Q9BYM8 510 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 FANCEQ9HB96 536 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 BATF3Q9NR55 127 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 NTMQ9P121 344 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 ANGPT4Q9Y264 503 aa16.32■□□□□ 0.2
SRSF1-201ENST00000258962 CCDC88CQ9P219 2028 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 ACOX3O15254 700 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 STK17BO94768 372 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 OPN1SWP03999 348 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 HMGN2P05204 90 aaKnown RBP16.31■□□□□ 0.2
SRSF1-201ENST00000258962 MSL3P1P0C860 447 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 RNH1P13489 461 aaKnown RBP16.31■□□□□ 0.2
SRSF1-201ENST00000258962 MATN1P21941 496 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 MAGEA8P43361 318 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 KHKP50053 298 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 UCNP55089 124 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 MRPS35P82673 323 aaKnown RBP16.31■□□□□ 0.2
SRSF1-201ENST00000258962 PRR5P85299 388 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 TGIF1Q15583 401 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.31■□□□□ 0.2
SRSF1-201ENST00000258962 ZNF628Q5EBL2 1059 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 CRB2Q5IJ48 1285 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 INTS11Q5TA45 600 aaKnown RBP16.31■□□□□ 0.2
SRSF1-201ENST00000258962 TLDC1Q6P9B6 456 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 SLC30A8Q8IWU4 369 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 NUP43Q8NFH3 380 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 MIPOL1Q8TD10 442 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 COL26A1Q96A83 441 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 GIMAP5Q96F15 307 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 OTUB1Q96FW1 271 aaPredicted RBP16.31■□□□□ 0.2
SRSF1-201ENST00000258962 C16orf58Q96GQ5 468 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 PEX11GQ96HA9 241 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 TMEM19Q96HH6 336 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 NR1H4Q96RI1 486 aaPredicted RBP16.31■□□□□ 0.2
SRSF1-201ENST00000258962 ULBP3Q9BZM4 244 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 C3orf14Q9HBI5 128 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 OAZ3Q9UMX2 235 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 NUP210LQ5VU65 1888 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 FER1L5A0AVI2 2057 aa16.31■□□□□ 0.2
SRSF1-201ENST00000258962 PLOD2O00469 737 aa16.3■□□□□ 0.2
SRSF1-201ENST00000258962 SOCS2O14508 198 aa16.3■□□□□ 0.2
SRSF1-201ENST00000258962 DEAF1O75398 565 aaPredicted RBP16.3■□□□□ 0.2
SRSF1-201ENST00000258962 ATP1B1P05026 303 aa16.3■□□□□ 0.2
SRSF1-201ENST00000258962 BCHEP06276 602 aa16.3■□□□□ 0.2
SRSF1-201ENST00000258962 OR12D1P0DN82 309 aa16.3■□□□□ 0.2
SRSF1-201ENST00000258962 AVPR1BP47901 424 aa16.3■□□□□ 0.2
SRSF1-201ENST00000258962 LASP1Q14847 261 aaKnown RBP16.3■□□□□ 0.2
SRSF1-201ENST00000258962 RPS26P11Q5JNZ5 115 aaPredicted RBP16.3■□□□□ 0.2
SRSF1-201ENST00000258962 FHL5Q5TD97 284 aa16.3■□□□□ 0.2
SRSF1-201ENST00000258962 REEP3Q6NUK4 255 aa16.3■□□□□ 0.2
SRSF1-201ENST00000258962 BHLHB9Q6PI77 547 aa16.3■□□□□ 0.2
SRSF1-201ENST00000258962 DTX1Q86Y01 620 aa16.3■□□□□ 0.2
SRSF1-201ENST00000258962 GALNT4Q8N4A0 578 aa16.3■□□□□ 0.2
SRSF1-201ENST00000258962 IL22RA1Q8N6P7 574 aa16.3■□□□□ 0.2
SRSF1-201ENST00000258962 SIMC1Q8NDZ2 872 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms