RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 PHYHIPQ92561 330 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 DEFB118Q96PH6 123 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 IL4I1Q96RQ9 567 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 CCDC3Q9BQI4 270 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 EBPLQ9BY08 206 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 LRRN3Q9H3W5 708 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 TMEM184CQ9NVA4 438 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 CDH10Q9Y6N8 788 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 EML5Q05BV3 1969 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 A0A1W2PQL4 384 aaPredicted RBP3.93□□□□□ -1.78
UBE4A-201ENST00000252108 LAMTOR5O43504 91 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 TSPAN3O60637 253 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 DNAJB6O75190 326 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 RGS9O75916 674 aaPredicted RBP3.93□□□□□ -1.78
UBE4A-201ENST00000252108 DRD2P14416 443 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 TNNI3P19429 210 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 AQP1P29972 269 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 LCN1P31025 176 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 CNR2P34972 360 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 OR3A3P47888 321 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 HMGA2P52926 109 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 VLDLRP98155 873 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 SGCGQ13326 291 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 MDC1Q14676 2089 aaKnown RBP3.93□□□□□ -1.78
UBE4A-201ENST00000252108 EML3Q32P44 896 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 FBXO48Q5FWF7 155 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 CD276Q5ZPR3 534 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 TMPRSS11BQ86T26 416 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 TOMM5Q8N4H5 51 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 FAM26EQ8N5C1 309 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 OR52J3Q8NH60 311 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF671Q8TAW3 534 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 INPP5KQ9BT40 448 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 PPA2Q9H2U2 334 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 NMNAT1Q9HAN9 279 aaPredicted RBP3.93□□□□□ -1.78
UBE4A-201ENST00000252108 C12orf4Q9NQ89 552 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 COMMD3Q9UBI1 195 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 KCNN3Q9UGI6 736 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 EVLQ9UI08 416 aaPredicted RBP3.93□□□□□ -1.78
UBE4A-201ENST00000252108 SLC22A14Q9Y267 594 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF879B4DU55 563 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 H0YC42 278 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 HOXC11O43248 304 aaPredicted RBP3.93□□□□□ -1.78
UBE4A-201ENST00000252108 RCBTB2O95199 551 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 PCDH8O95206 1070 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 ETHE1O95571 254 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 WDPCPO95876 746 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 C1GALT1C1LP0DN25 315 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 ACP2P11117 423 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 IL32P24001 234 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 CD70P32970 193 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 MMP12P39900 470 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 CENPAP49450 140 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 TAP2Q03519 686 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 SCRN3Q0VDG4 424 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 FZD5Q13467 585 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 GTDC1Q4AE62 458 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 MINDY4Q4G0A6 757 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 C2orf27AQ580R0 203 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 PLPP4Q5VZY2 271 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 FAM122CQ6P4D5 195 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 RFLNAQ6ZTI6 216 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 VTCN1Q7Z7D3 282 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 RANBP3LQ86VV4 465 aaPredicted RBP3.93□□□□□ -1.78
UBE4A-201ENST00000252108 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.93□□□□□ -1.78
UBE4A-201ENST00000252108 ETFBKMTQ8IXQ9 262 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 MEIOBQ8N635 442 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 NANOGP1Q8N7R0 232 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 LRRC3BQ96PB8 259 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 SRRQ9GZT4 340 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 C14orf119Q9NWQ9 140 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF224Q9NZL3 707 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 TNFRSF10DQ9UBN6 386 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 FBXO9Q9UK97 447 aaPredicted RBP3.93□□□□□ -1.78
UBE4A-201ENST00000252108 MAP4K5Q9Y4K4 846 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 TNRC18O15417 2968 aaPredicted RBP3.92□□□□□ -1.78
UBE4A-201ENST00000252108 SGK494L7N484 410 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 OR7A10O76100 309 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 MT-ND5P03915 603 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 GAAP10253 952 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 PRG2P13727 222 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 NUP62P37198 522 aaPredicted RBP3.92□□□□□ -1.78
UBE4A-201ENST00000252108 MTNR1BP49286 362 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 CDH11P55287 796 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 AGERQ15109 404 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF77Q15935 545 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 SIGIRRQ6IA17 410 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 IQCF2Q8IXL9 164 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 OR8H3Q8N146 312 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 GPR156Q8NFN8 814 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 OR52N1Q8NH53 320 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 OR56A3Q8NH54 315 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 WFIKKN2Q8TEU8 576 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 TTYH2Q9BSA4 534 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 NDC1Q9BTX1 674 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 PELI2Q9HAT8 420 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 CAPN10Q9HC96 672 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 AMBNQ9NP70 447 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 A4GALTQ9NPC4 353 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 MRPL17Q9NRX2 175 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms