RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 OR4E2Q8NGC2 313 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 SCARF2Q96GP6 870 aaPredicted RBP18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 ZNF681Q96N22 645 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 OR7D2Q96RA2 312 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 GIN1Q9NXP7 522 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 RPL36Q9Y3U8 105 aaKnown RBP18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 TICRRQ7Z2Z1 1910 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 A0A0G2JPF8 293 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 POM121BA6NF01 834 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 HNRNPCL2B2RXH8 293 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 HNRNPCL3B7ZW38 293 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 TLX2O43763 284 aaPredicted RBP18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 ASGR2P07307 311 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 HNRNPCL4P0DMR1 293 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 CSNK2A2P19784 350 aaPredicted RBP18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 SLC13A2Q13183 592 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 OCLNQ16625 522 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 C1orf94Q6P1W5 598 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 PAQR6Q6TCH4 344 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 EGFL6Q8IUX8 553 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 PARP16Q8N5Y8 322 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 OR56A1Q8NGH5 318 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 PBX4Q9BYU1 374 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 KIR3DX1Q9H7L2 352 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 PRSS38A1L453 326 aa18.36■□□□□ 0.53
CDC42EP1-201ENST00000249014 EPOPA6NHQ4 379 aa18.36■□□□□ 0.53
CDC42EP1-201ENST00000249014 FRS3O43559 492 aa18.36■□□□□ 0.53
CDC42EP1-201ENST00000249014 HBQ1P09105 142 aa18.36■□□□□ 0.53
CDC42EP1-201ENST00000249014 MAGEA8P43361 318 aa18.36■□□□□ 0.53
CDC42EP1-201ENST00000249014 ANXA11P50995 505 aaKnown RBP18.36■□□□□ 0.53
CDC42EP1-201ENST00000249014 ARFIP1P53367 373 aa18.36■□□□□ 0.53
CDC42EP1-201ENST00000249014 COX10Q12887 443 aa18.36■□□□□ 0.53
CDC42EP1-201ENST00000249014 GINS1Q14691 196 aa18.36■□□□□ 0.53
CDC42EP1-201ENST00000249014 SPHARQ15513 63 aa18.36■□□□□ 0.53
CDC42EP1-201ENST00000249014 LTB4RQ15722 352 aa18.36■□□□□ 0.53
CDC42EP1-201ENST00000249014 TIMM50Q3ZCQ8 353 aa18.36■□□□□ 0.53
CDC42EP1-201ENST00000249014 STEAP3Q658P3 488 aa18.36■□□□□ 0.53
CDC42EP1-201ENST00000249014 FAM83FQ8NEG4 500 aaPredicted RBP18.36■□□□□ 0.53
CDC42EP1-201ENST00000249014 ELSPBP1Q96BH3 223 aa18.36■□□□□ 0.53
CDC42EP1-201ENST00000249014 ELP4Q96EB1 424 aa18.36■□□□□ 0.53
CDC42EP1-201ENST00000249014 TRNT1Q96Q11 434 aaKnown RBP18.36■□□□□ 0.53
CDC42EP1-201ENST00000249014 PINK1Q9BXM7 581 aa18.36■□□□□ 0.53
CDC42EP1-201ENST00000249014 PLA2G12AQ9BZM1 189 aa18.36■□□□□ 0.53
CDC42EP1-201ENST00000249014 SLC38A1Q9H2H9 487 aa18.36■□□□□ 0.53
CDC42EP1-201ENST00000249014 C6orf106Q9H6K1 298 aaPredicted RBP18.36■□□□□ 0.53
CDC42EP1-201ENST00000249014 POLMQ9NP87 494 aaPredicted RBP18.36■□□□□ 0.53
CDC42EP1-201ENST00000249014 GPR55Q9Y2T6 319 aaPredicted RBP18.36■□□□□ 0.53
CDC42EP1-201ENST00000249014 BTN3A3O00478 584 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 CASC3O15234 703 aaKnown RBP18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 EMC8O43402 210 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 NTN1O95631 604 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 CHRM5P08912 532 aaPredicted RBP18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 COL9A1P20849 921 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 AK4P27144 223 aaPredicted RBP18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 S100A5P33763 92 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 GIPRP48546 466 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 PCYT1AP49585 367 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 CLDN2P57739 230 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 BTN3A2P78410 334 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 PRR5P85299 388 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 CDK5Q00535 292 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 CHRNEQ04844 493 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 PRKCDQ05655 676 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 GNA13Q14344 377 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 CEBPEQ15744 281 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 TJAP1Q5JTD0 557 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 AGAP7PQ5VUJ5 663 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 VN1R4Q7Z5H5 301 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 AMIGO1Q86WK6 493 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 VRK2Q86Y07 508 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 KIF18BQ86Y91 864 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 FAM26EQ8N5C1 309 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 NUP43Q8NFH3 380 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 KAT2AQ92830 837 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 FGF11Q92914 225 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 MOAP1Q96BY2 351 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 C1QTNF7Q9BXJ2 289 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 POLDIP3Q9BY77 421 aaKnown RBP18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 CHST2Q9Y4C5 530 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 MYO9BQ13459 2157 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 GTF2E2P29084 291 aaKnown RBP18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 MPIP34949 423 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 TNFRSF4P43489 277 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 SEPHS1P49903 392 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 EFNB1P98172 346 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 SYT14P1Q58G82 188 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 NANOGP1Q8N7R0 232 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 SRFBP1Q8NEF9 429 aaKnown RBP18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 OR2M4Q96R27 311 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 SNX7Q9UNH6 387 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 CA5BQ9Y2D0 317 aa18.35■□□□□ 0.53
CDC42EP1-201ENST00000249014 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 A0A087WUU8 490 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 LAMP2P13473 410 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 NTSR1P30989 418 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 TSFMP43897 325 aaKnown RBP18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 STXBP1P61764 594 aaKnown RBP18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 ZNF45Q02386 682 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 NDUFA9Q16795 377 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 ZNF181Q2M3W8 571 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms