RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 CHRNEQ04844 493 aa17.33■□□□□ 0.37
HOXC11-201ENST00000243082 PIN1Q13526 163 aaPredicted RBP17.33■□□□□ 0.37
HOXC11-201ENST00000243082 ELOCQ15369 112 aa17.33■□□□□ 0.37
HOXC11-201ENST00000243082 LEXMQ3ZCV2 418 aa17.33■□□□□ 0.37
HOXC11-201ENST00000243082 FGD3Q5JSP0 725 aa17.33■□□□□ 0.37
HOXC11-201ENST00000243082 ARL14Q8N4G2 192 aa17.33■□□□□ 0.37
HOXC11-201ENST00000243082 ZNF540Q8NDQ6 660 aa17.33■□□□□ 0.37
HOXC11-201ENST00000243082 CADM4Q8NFZ8 388 aa17.33■□□□□ 0.37
HOXC11-201ENST00000243082 RHOXF1Q8NHV9 184 aa17.33■□□□□ 0.37
HOXC11-201ENST00000243082 FAM81AQ8TBF8 368 aa17.33■□□□□ 0.37
HOXC11-201ENST00000243082 ZG16BQ96DA0 208 aa17.33■□□□□ 0.37
HOXC11-201ENST00000243082 TMCC3Q9ULS5 477 aa17.33■□□□□ 0.37
HOXC11-201ENST00000243082 TRIM64BA6NI03 449 aa17.33■□□□□ 0.36
HOXC11-201ENST00000243082 TLR4O00206 839 aa17.33■□□□□ 0.36
HOXC11-201ENST00000243082 UBXN7O94888 489 aa17.33■□□□□ 0.36
HOXC11-201ENST00000243082 ZIC2O95409 532 aaPredicted RBP17.33■□□□□ 0.36
HOXC11-201ENST00000243082 ID2Q02363 134 aa17.33■□□□□ 0.36
HOXC11-201ENST00000243082 DCST1Q5T197 706 aa17.33■□□□□ 0.36
HOXC11-201ENST00000243082 HEPHL1Q6MZM0 1159 aa17.33■□□□□ 0.36
HOXC11-201ENST00000243082 CA13Q8N1Q1 262 aa17.33■□□□□ 0.36
HOXC11-201ENST00000243082 ARHGEF39Q8N4T4 335 aa17.33■□□□□ 0.36
HOXC11-201ENST00000243082 SLC16A11Q8NCK7 471 aa17.33■□□□□ 0.36
HOXC11-201ENST00000243082 OR6T1Q8NGN1 323 aa17.33■□□□□ 0.36
HOXC11-201ENST00000243082 FAR1Q8WVX9 515 aa17.33■□□□□ 0.36
HOXC11-201ENST00000243082 MS4A4EQ96PG1 132 aa17.33■□□□□ 0.36
HOXC11-201ENST00000243082 PINK1Q9BXM7 581 aa17.33■□□□□ 0.36
HOXC11-201ENST00000243082 SLC9A8Q9Y2E8 581 aa17.33■□□□□ 0.36
HOXC11-201ENST00000243082 CASC3O15234 703 aaKnown RBP17.32■□□□□ 0.36
HOXC11-201ENST00000243082 FGF17O60258 216 aa17.32■□□□□ 0.36
HOXC11-201ENST00000243082 FAM20BO75063 409 aa17.32■□□□□ 0.36
HOXC11-201ENST00000243082 LDB3O75112 727 aa17.32■□□□□ 0.36
HOXC11-201ENST00000243082 INMTO95050 263 aa17.32■□□□□ 0.36
HOXC11-201ENST00000243082 OXSR1O95747 527 aaPredicted RBP17.32■□□□□ 0.36
HOXC11-201ENST00000243082 GABRB1P18505 474 aa17.32■□□□□ 0.36
HOXC11-201ENST00000243082 FASLGP48023 281 aa17.32■□□□□ 0.36
HOXC11-201ENST00000243082 RACK1P63244 317 aaKnown RBP17.32■□□□□ 0.36
HOXC11-201ENST00000243082 PTGES3Q15185 160 aaKnown RBP17.32■□□□□ 0.36
HOXC11-201ENST00000243082 DEFB110Q30KQ9 67 aa17.32■□□□□ 0.36
HOXC11-201ENST00000243082 ZNF628Q5EBL2 1059 aa17.32■□□□□ 0.36
HOXC11-201ENST00000243082 CDC73Q6P1J9 531 aa17.32■□□□□ 0.36
HOXC11-201ENST00000243082 IQCHQ86VS3 1027 aa17.32■□□□□ 0.36
HOXC11-201ENST00000243082 CCDC103Q8IW40 242 aa17.32■□□□□ 0.36
HOXC11-201ENST00000243082 C19orf47Q8N9M1 422 aaKnown RBP17.32■□□□□ 0.36
HOXC11-201ENST00000243082 SLC7A13Q8TCU3 470 aa17.32■□□□□ 0.36
HOXC11-201ENST00000243082 LMX1AQ8TE12 382 aa17.32■□□□□ 0.36
HOXC11-201ENST00000243082 ADAMTS15Q8TE58 950 aa17.32■□□□□ 0.36
HOXC11-201ENST00000243082 CCDC3Q9BQI4 270 aa17.32■□□□□ 0.36
HOXC11-201ENST00000243082 ZNF226Q9NYT6 803 aa17.32■□□□□ 0.36
HOXC11-201ENST00000243082 TMEM9Q9P0T7 183 aa17.32■□□□□ 0.36
HOXC11-201ENST00000243082 PTGFRNQ9P2B2 879 aa17.32■□□□□ 0.36
HOXC11-201ENST00000243082 WNT16Q9UBV4 365 aa17.32■□□□□ 0.36
HOXC11-201ENST00000243082 FTSJ1Q9UET6 329 aa17.32■□□□□ 0.36
HOXC11-201ENST00000243082 FAAHO00519 579 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 ADAP00813 363 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 CDH3P22223 829 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 TMBIM6P55061 237 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 GP2P55259 537 aaKnown RBP17.31■□□□□ 0.36
HOXC11-201ENST00000243082 SMIM11AP58511 58 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 CSNK2BP67870 215 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 SHC2P98077 582 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 TRMT12Q53H54 448 aaKnown RBP17.31■□□□□ 0.36
HOXC11-201ENST00000243082 ATAD3BQ5T9A4 648 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 FHL5Q5TD97 284 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 NLGN4XQ8N0W4 816 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 SIGLEC11Q96RL6 698 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 DGCR6LQ9BY27 220 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 PCED1AQ9H1Q7 454 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 DNAAF2Q9NVR5 837 aaKnown RBP17.31■□□□□ 0.36
HOXC11-201ENST00000243082 CALML5Q9NZT1 146 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 REV1Q9UBZ9 1251 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 ENOPH1Q9UHY7 261 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 HEMK1Q9Y5R4 338 aaPredicted RBP17.31■□□□□ 0.36
HOXC11-201ENST00000243082 SPACA6W5XKT8 324 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 A0A1W2PRQ8 180 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 SLC9B1P1A6NJY1 282 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 DUXAA6NLW8 204 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 SGK494L7N484 410 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 FCMRO60667 390 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 MT-ND2P03891 347 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 ATP1B1P05026 303 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 CHMP24386 653 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 IDH2P48735 452 aaKnown RBP17.31■□□□□ 0.36
HOXC11-201ENST00000243082 PDX1P52945 283 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 CRISP1P54107 249 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 DGCR6Q14129 220 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 FAM214AQ32MH5 1076 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 ZNF311Q5JNZ3 666 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 MLIPQ5VWP3 458 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 C16orf62Q7Z3J2 963 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 GKN2Q86XP6 184 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 GJD3Q8N144 294 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 AVL9Q8NBF6 648 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 MAN2C1Q9NTJ4 1040 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 PLCXD1Q9NUJ7 323 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 FBXL21Q9UKT6 434 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 SLC6A14Q9UN76 642 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 C19orf53Q9UNZ5 99 aaPredicted RBP17.31■□□□□ 0.36
HOXC11-201ENST00000243082 MGAT4BQ9UQ53 548 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 CHST2Q9Y4C5 530 aa17.31■□□□□ 0.36
HOXC11-201ENST00000243082 SCN2AQ99250 2005 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms