RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 REM2Q8IYK8 340 aaPredicted RBP13.22□□□□□ -0.29
TARDBP-201ENST00000240185 CCDC71LQ8N9Z2 235 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 OR4K14Q8NGD5 310 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 ARHGAP39Q9C0H5 1083 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 OR8D2Q9GZM6 311 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 MTFR1LQ9H019 292 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 GPR52Q9Y2T5 361 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 IL33O95760 270 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 DLX5P56178 289 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 LIPJQ5W064 366 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 PLBD1Q6P4A8 553 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 ZNF705AQ6ZN79 300 aaPredicted RBP13.22□□□□□ -0.29
TARDBP-201ENST00000240185 SGPP2Q8IWX5 399 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 SLC5A8Q8N695 610 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 OR4E2Q8NGC2 313 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 OR5D16Q8NGK9 328 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 OR9A1PQ8NGU1 263 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 WTIPA6NIX2 430 aaPredicted RBP13.22□□□□□ -0.29
TARDBP-201ENST00000240185 SHOXO15266 292 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 MMP20O60882 483 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 CLN5O75503 358 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 FHP07954 510 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 HSD17B1P14061 328 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 GGT1P19440 569 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 CDK5R2Q13319 367 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 APOFQ13790 326 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 PAFAH1B3Q15102 231 aaKnown RBP13.22□□□□□ -0.29
TARDBP-201ENST00000240185 FAM69AQ5T7M9 428 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 SMYD5Q6GMV2 418 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 BRAT1Q6PJG6 821 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 CPT1CQ8TCG5 803 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 GATA6Q92908 595 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 DNTTIP1Q9H147 329 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 NTN4Q9HB63 628 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 TMPRSS11EQ9UL52 423 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 COPS3Q9UNS2 423 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 MAFBQ9Y5Q3 323 aaPredicted RBP13.22□□□□□ -0.29
TARDBP-201ENST00000240185 PTGDR2Q9Y5Y4 395 aa13.22□□□□□ -0.29
TARDBP-201ENST00000240185 TSPAN11A1L157 253 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 RAB19A4D1S5 217 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 WNT4P56705 351 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 TAS2R31P59538 309 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 FXYD4P59646 89 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 OGDHQ02218 1023 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 SERINC3Q13530 473 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 RAB31Q13636 194 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 RNF151Q2KHN1 245 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 FAM214AQ32MH5 1076 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 ADGRF1Q5T601 910 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 RCBTB1Q8NDN9 531 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 BTBD2Q9BX70 525 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 IL36AQ9UHA7 158 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 LIPT1Q9Y234 373 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 TEX51A0A1B0GUA7 166 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 A0A1W2PQ09 198 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 KRBOX1C9JBD0 128 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 RFXAPO00287 272 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 CSF1P09603 554 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 THBS2P35442 1172 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 RNF144AP50876 292 aaPredicted RBP13.21□□□□□ -0.29
TARDBP-201ENST00000240185 CRHR2Q13324 411 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 KCNC3Q14003 757 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 TATDN3Q17R31 274 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 TECRLQ5HYJ1 363 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 AWAT2Q6E213 333 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 ZNF695Q8IW36 515 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 ZNF439Q8NDP4 499 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 OR52E2Q8NGJ4 325 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 SUN3Q8TAQ9 357 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 DNAJA3Q96EY1 480 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 FUBP3Q96I24 572 aaKnown RBP eCLIP13.21□□□□□ -0.29
TARDBP-201ENST00000240185 HS6ST2Q96MM7 605 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 MICU1Q9BPX6 476 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 OR51E2Q9H255 320 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 INTS6Q9UL03 887 aaKnown RBP13.21□□□□□ -0.29
TARDBP-201ENST00000240185 PLAGL1Q9UM63 463 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 KIF20BQ96Q89 1820 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 MEIS3P2A8K0S8 358 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 RPL17P18621 184 aaKnown RBP13.21□□□□□ -0.29
TARDBP-201ENST00000240185 M6PRP20645 277 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 MSX1P28360 303 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 TGM4P49221 684 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 CX3CR1P49238 355 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 GPR143P51810 404 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 HTRA4P83105 476 aaPredicted RBP13.21□□□□□ -0.29
TARDBP-201ENST00000240185 PTPRCAPQ14761 206 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 LRIT3Q3SXY7 679 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 AARDQ4LEZ3 155 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 TMEM234Q8WY98 164 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 MOCOSQ96EN8 888 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 ZBED3Q96IU2 234 aaPredicted RBP13.21□□□□□ -0.29
TARDBP-201ENST00000240185 SMIM3Q9BZL3 60 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 TSPAN10Q9H1Z9 355 aaPredicted RBP13.21□□□□□ -0.29
TARDBP-201ENST00000240185 MRM3Q9HC36 420 aaKnown RBP13.21□□□□□ -0.29
TARDBP-201ENST00000240185 SPATA31D1Q6ZQQ2 1576 aa13.21□□□□□ -0.29
TARDBP-201ENST00000240185 B4DGG1 531 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 BHLHE40O14503 412 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 EPHA1P21709 976 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 GABRA3P34903 492 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 KCNC1P48547 511 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms