RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 NANOGP8Q6NSW7 305 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 OPN5Q6U736 354 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 TIPARPQ7Z3E1 657 aaKnown RBP10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 SLC30A8Q8IWU4 369 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 TMEM102Q8N9M5 508 aaPredicted RBP10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 SDCCAG3Q96C92 435 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 FBXL20Q96IG2 436 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 C5orf34Q96MH7 638 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 ANKRD27Q96NW4 1050 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 MMADHCQ9H3L0 296 aaPredicted RBP10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 NANOGQ9H9S0 305 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 SDHAF3Q9NRP4 125 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 BAG2O95816 211 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 HNRNPFP52597 415 aaKnown RBP10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 CDK6Q00534 326 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 GTDC1Q4AE62 458 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 OR52N2Q8NGI0 321 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 ZNF354BQ96LW1 612 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 CXorf36Q9H7Y0 433 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 STMN3Q9NZ72 180 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 RPS6KA6Q9UK32 745 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 ACACAQ13085 2346 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 MYO1GB0I1T2 1018 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 TBX19O60806 448 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 MED26O95402 600 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 ERFP50548 548 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 BNIP2Q12982 314 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 ATP1A4Q13733 1029 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 ZNF630Q2M218 657 aaPredicted RBP10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 FUNDC1Q8IVP5 155 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 SIRT6Q8N6T7 355 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 FAM98AQ8NCA5 519 aaKnown RBP10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 OR8J3Q8NGG0 315 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 GIN1Q9NXP7 522 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 EGFL7Q9UHF1 273 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 HEMK1Q9Y5R4 338 aaPredicted RBP10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 SAGE2PA6NJ88 616 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 ATP1B1P05026 303 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 LIFP15018 202 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 FOXL2P58012 376 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 CHRNB3Q05901 458 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 BNIP1Q12981 228 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 AIMP2Q13155 320 aaKnown RBP10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 RTP5Q14D33 572 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 FLYWCH1Q4VC44 716 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 RABL3Q5HYI8 236 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 FIGNL1Q6PIW4 674 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 FAM198BQ6UWH4 519 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 LINC00696Q6ZRV3 163 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 UCN3Q969E3 161 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 ZNF717Q9BY31 904 aaPredicted RBP10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 CDCP1Q9H5V8 836 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 IL17BQ9UHF5 180 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 C19orf53Q9UNZ5 99 aaPredicted RBP10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 E2F6O75461 281 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 P04436 131 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 ARHGDIAP52565 204 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 PLGLB1Q02325 96 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 VAC14Q08AM6 782 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 ZCCHC12Q6PEW1 402 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 PATL1Q86TB9 770 aaKnown RBP10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 PRR22Q8IZ63 422 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 ZCCHC14Q8WYQ9 949 aaKnown RBP10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 ANKRD9Q96BM1 317 aaPredicted RBP10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 LCORQ96JN0 433 aaPredicted RBP10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 DPH1Q9BZG8 443 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 SLC9A8Q9Y2E8 581 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 MRPS18BQ9Y676 258 aaKnown RBP10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 HEATR5BQ9P2D3 2071 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 TRIOO75962 3097 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 MAP1BP46821 2468 aaKnown RBP10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 CNTRLQ7Z7A1 2325 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 SSR4P51571 173 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 EEFSECP57772 596 aaKnown RBP10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 FBXW4P57775 412 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 SLC26A5P58743 744 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 PDE7AQ13946 482 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 CYP2R1Q6VVX0 501 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 RINLQ6ZS11 566 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 GALNT10Q86SR1 603 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 CYP4Z1Q86W10 505 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 TMEM52Q8NDY8 209 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 OR1N1Q8NGS0 311 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 RASSF5Q8WWW0 418 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 DIO2Q92813 273 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 MAT2BQ9NZL9 334 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 OR6C76A6NM76 312 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 MKRN2OSH3BPM6 223 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 STX11O75558 287 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 DLGAP3O95886 979 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 KCNJ2P63252 427 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 AGAP7PQ5VUJ5 663 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 GLYATQ6IB77 296 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 WDR53Q7Z5U6 358 aaPredicted RBP10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 MRGPREQ86SM8 312 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 FCRL1Q96LA6 429 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 COL21A1Q96P44 957 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 AGAP4Q96P64 663 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 SPSB2Q99619 263 aa10.37□□□□□ -0.75
TNFAIP3-201ENST00000237289 UTP23Q9BRU9 249 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms