RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 FAM46AQ96IP4 442 aaKnown RBP8.62□□□□□ -1.03
SYDE2-201ENST00000234668 CDCA4Q9BXL8 241 aa8.62□□□□□ -1.03
SYDE2-201ENST00000234668 SLC25A19Q9HC21 320 aa8.62□□□□□ -1.03
SYDE2-201ENST00000234668 SLC6A20Q9NP91 592 aa8.62□□□□□ -1.03
SYDE2-201ENST00000234668 MRPS30Q9NP92 439 aaKnown RBP8.62□□□□□ -1.03
SYDE2-201ENST00000234668 P2RX2Q9UBL9 471 aa8.62□□□□□ -1.03
SYDE2-201ENST00000234668 MDC1Q14676 2089 aaKnown RBP8.61□□□□□ -1.03
SYDE2-201ENST00000234668 A0A087WUU8 490 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 FAM183AA6NL82 134 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 SLC2A10O95528 541 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 AIFM1O95831 613 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 ADAP00813 363 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 CXCR2P25025 360 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 TRHRP34981 398 aaPredicted RBP8.61□□□□□ -1.03
SYDE2-201ENST00000234668 SOX6P35712 828 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 CRYBB2P43320 205 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 GPR4P46093 362 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 RFX3P48380 749 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 BTN3A2P78410 334 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 SLC9A5Q14940 896 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 EIF4HQ15056 248 aaKnown RBP8.61□□□□□ -1.03
SYDE2-201ENST00000234668 FBXO43Q4G163 708 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 SLC30A6Q6NXT4 461 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 NRARPQ7Z6K4 114 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 GATAD2AQ86YP4 633 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 NKAIN4Q8IVV8 208 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 SFTPA2Q8IWL1 248 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 NACC2Q96BF6 587 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 NEUROD4Q9HD90 331 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 TBC1D3DA0A087WVF3 549 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 TBC1D3IA0A087WXS9 549 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 TBC1D3EA0A087X179 549 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 TBC1D3KA0A087X1G2 549 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 NPIPA5A0A0B4J1W7 369 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 TBC1D3FA6NER0 549 aaPredicted RBP8.61□□□□□ -1.03
SYDE2-201ENST00000234668 TMEM221A6NGB7 291 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 TBC1D3LB9A6J9 549 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 NPIPA7E9PJI5 369 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 MYL12BO14950 172 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 MRPS14O60783 128 aaKnown RBP8.61□□□□□ -1.03
SYDE2-201ENST00000234668 CSF2P04141 144 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 HNRNPA1P09651 372 aaKnown RBP eCLIP8.61□□□□□ -1.03
SYDE2-201ENST00000234668 TBC1D3HP0C7X1 549 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 NPIPA8P0DM63 369 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 CSTF2P33240 577 aaKnown RBP eCLIP8.61□□□□□ -1.03
SYDE2-201ENST00000234668 SLC15A1P46059 708 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 TAS2R41P59536 307 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 TFF2Q03403 129 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 HYAL2Q12891 473 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 PDGFRLQ15198 375 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 SYT14P1Q58G82 188 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 SLX4IPQ5VYV7 408 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 TBC1D3GQ6DHY5 549 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 TBC1D3CQ6IPX1 549 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 ZNF765Q7L2R6 523 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 TBC1D3Q8IZP1 549 aaPredicted RBP8.61□□□□□ -1.03
SYDE2-201ENST00000234668 OR4F15Q8NGB8 312 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 OR52I1Q8NGK6 324 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 OR8D4Q8NGM9 314 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 SUN3Q8TAQ9 357 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 TM9SF4Q92544 642 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 DMRTB1Q96MA1 342 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 TRNT1Q96Q11 434 aaKnown RBP8.61□□□□□ -1.03
SYDE2-201ENST00000234668 FBXL12Q9NXK8 326 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 ANKMY1Q9P2S6 941 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 PRKAG2Q9UGJ0 569 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 APOBEC3BQ9UH17 382 aaKnown RBP8.61□□□□□ -1.03
SYDE2-201ENST00000234668 DPP7Q9UHL4 492 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 MGAT4BQ9UQ53 548 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 DSPPQ9NZW4 1301 aa8.61□□□□□ -1.03
SYDE2-201ENST00000234668 A0A0A6YYD5 115 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 CENPVL1A0A0U1RR11 272 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 A0A1W2PQU0 124 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 ZC3H12DA2A288 527 aaKnown RBP8.6□□□□□ -1.03
SYDE2-201ENST00000234668 POM121BA6NF01 834 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 BTN3A3O00478 584 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 FAAHO00519 579 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 MAN2B1O00754 1011 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 DVL2O14641 736 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 NCR1O76036 304 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 ALOX5P09917 674 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 PSMA1P25786 263 aaKnown RBP8.6□□□□□ -1.03
SYDE2-201ENST00000234668 PPP2R1BP30154 601 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 PCYT1AP49585 367 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 SGCGQ13326 291 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 SF3B4Q15427 424 aaKnown RBP eCLIP8.6□□□□□ -1.03
SYDE2-201ENST00000234668 ZNF311Q5JNZ3 666 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 KIAA1161Q6NSJ0 714 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 ADAMTSL4Q6UY14 1074 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 ZNF513Q8N8E2 541 aaPredicted RBP8.6□□□□□ -1.03
SYDE2-201ENST00000234668 SMAP2Q8WU79 429 aaPredicted RBP8.6□□□□□ -1.03
SYDE2-201ENST00000234668 MS4A6EQ96DS6 147 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 DCLRE1CQ96SD1 692 aaKnown RBP8.6□□□□□ -1.03
SYDE2-201ENST00000234668 SLC30A2Q9BRI3 323 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 MMP28Q9H239 520 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 DDX31Q9H8H2 851 aaKnown RBP8.6□□□□□ -1.03
SYDE2-201ENST00000234668 WASH6PQ9NQA3 447 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 PRDM7Q9NQW5 492 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 SEMA4GQ9NTN9 838 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 KLK4Q9Y5K2 254 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms