RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 LRRC61Q9BV99 259 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 POLR2J2Q9GZM3 115 aaKnown RBP10.02□□□□□ -0.81
CDCA3-201ENST00000229265 POLR2J3Q9H1A7 115 aaKnown RBP10.02□□□□□ -0.81
CDCA3-201ENST00000229265 MTHFD2LQ9H903 347 aaPredicted RBP10.02□□□□□ -0.81
CDCA3-201ENST00000229265 ZNF556Q9HAH1 456 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 SMURF2Q9HAU4 748 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 CCNB1IP1Q9NPC3 277 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 SLAMF7Q9NQ25 335 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 ZCCHC3Q9NUD5 404 aaKnown RBP10.02□□□□□ -0.81
CDCA3-201ENST00000229265 PLCXD1Q9NUJ7 323 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 SCN3BQ9NY72 215 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 PDP1Q9P0J1 537 aaPredicted RBP10.02□□□□□ -0.81
CDCA3-201ENST00000229265 FTSJ1Q9UET6 329 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 KCND3Q9UK17 655 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 ACAD8Q9UKU7 415 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 POMT2Q9UKY4 750 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 NDRG4Q9ULP0 352 aaKnown RBP10.02□□□□□ -0.81
CDCA3-201ENST00000229265 POFUT2Q9Y2G5 429 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 IFT52Q9Y366 437 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 AK5Q9Y6K8 562 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 V9GYQ6 96 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 ACACAQ13085 2346 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 PGRMC2O15173 223 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 LDOC1O95751 146 aaPredicted RBP10.01□□□□□ -0.81
CDCA3-201ENST00000229265 AK1P00568 194 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 FESP07332 822 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 NR2F6P10588 404 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 PORP16435 677 aaPredicted RBP10.01□□□□□ -0.81
CDCA3-201ENST00000229265 MAGP20916 626 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 CRHBPP24387 322 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 IFNA8P32881 189 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 GALNSP34059 522 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 TNFRSF17Q02223 184 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 NPRL3Q12980 569 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 TARDBPQ13148 414 aaKnown RBP eCLIP10.01□□□□□ -0.81
CDCA3-201ENST00000229265 FAM53BQ14153 422 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 COLEC12Q5KU26 742 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 ATAD3BQ5T9A4 648 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 BROXQ5VW32 411 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 ZNF773Q6PK81 442 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 TMPRSS9Q7Z410 1059 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 VTCN1Q7Z7D3 282 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 TMEM179BQ7Z7N9 219 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 ZNF605Q86T29 641 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 PLD3Q8IV08 490 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 CCDC116Q8IYX3 515 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 DEPDC4Q8N2C3 294 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 LRRC25Q8N386 305 aaPredicted RBP10.01□□□□□ -0.81
CDCA3-201ENST00000229265 TTC29Q8NA56 475 aaPredicted RBP10.01□□□□□ -0.81
CDCA3-201ENST00000229265 OR4C15Q8NGM1 316 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 SUN3Q8TAQ9 357 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 SLC37A2Q8TED4 501 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 ZFAND2BQ8WV99 257 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 TRUB1Q8WWH5 349 aaKnown RBP10.01□□□□□ -0.81
CDCA3-201ENST00000229265 IPCEF1Q8WWN9 437 aaPredicted RBP10.01□□□□□ -0.81
CDCA3-201ENST00000229265 MAL2Q969L2 176 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 TAMM41Q96BW9 452 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 CNRIP1Q96F85 164 aaPredicted RBP10.01□□□□□ -0.81
CDCA3-201ENST00000229265 DHRS1Q96LJ7 313 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 C10orf90Q96M02 699 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 ZNF578Q96N58 590 aaPredicted RBP10.01□□□□□ -0.81
CDCA3-201ENST00000229265 MBOAT4Q96T53 435 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 PITX2Q99697 317 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 MAPKAP1Q9BPZ7 522 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 PINK1Q9BXM7 581 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 GABARAPL3Q9BY60 117 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 ACTRT3Q9BYD9 372 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 AMBRA1Q9C0C7 1298 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 ANKRD19PQ9H560 264 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 POLE3Q9NRF9 147 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 KRT84Q9NSB2 600 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 ACER3Q9NUN7 267 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 TMEM9Q9P0T7 183 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 ABCG2Q9UNQ0 655 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 ZNF232Q9UNY5 417 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 MGAT4BQ9UQ53 548 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 LYVE1Q9Y5Y7 322 aa10.01□□□□□ -0.81
CDCA3-201ENST00000229265 PCM1Q15154 2024 aa10□□□□□ -0.81
CDCA3-201ENST00000229265 URB1O60287 2271 aaKnown RBP10□□□□□ -0.81
CDCA3-201ENST00000229265 PRAMEF33A0A0G2JMD5 474 aa10□□□□□ -0.81
CDCA3-201ENST00000229265 LMO7DNF2Z398 122 aa10□□□□□ -0.81
CDCA3-201ENST00000229265 H0YGG7 62 aa10□□□□□ -0.81
CDCA3-201ENST00000229265 AGRPO00253 132 aa10□□□□□ -0.81
CDCA3-201ENST00000229265 AHCYL1O43865 530 aa10□□□□□ -0.81
CDCA3-201ENST00000229265 PLOD3O60568 738 aa10□□□□□ -0.81
CDCA3-201ENST00000229265 GALR3O60755 368 aaPredicted RBP10□□□□□ -0.81
CDCA3-201ENST00000229265 CTSVO60911 334 aa10□□□□□ -0.81
CDCA3-201ENST00000229265 ABCB7O75027 752 aa10□□□□□ -0.81
CDCA3-201ENST00000229265 ERAL1O75616 437 aaKnown RBP10□□□□□ -0.81
CDCA3-201ENST00000229265 UBXN7O94888 489 aa10□□□□□ -0.81
CDCA3-201ENST00000229265 GADD45GO95257 159 aa10□□□□□ -0.81
CDCA3-201ENST00000229265 GPR75O95800 540 aa10□□□□□ -0.81
CDCA3-201ENST00000229265 AIFM1O95831 613 aa10□□□□□ -0.81
CDCA3-201ENST00000229265 LGI1O95970 557 aa10□□□□□ -0.81
CDCA3-201ENST00000229265 MT-ND1P03886 318 aa10□□□□□ -0.81
CDCA3-201ENST00000229265 ATP1B1P05026 303 aa10□□□□□ -0.81
CDCA3-201ENST00000229265 GNAO1P09471 354 aa10□□□□□ -0.81
CDCA3-201ENST00000229265 NR2F1P10589 423 aa10□□□□□ -0.81
CDCA3-201ENST00000229265 CD247P20963 164 aa10□□□□□ -0.81
CDCA3-201ENST00000229265 CDK9P50750 372 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms