RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 OSBPL10Q9BXB5 764 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 LRRN3Q9H3W5 708 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 FGF21Q9NSA1 209 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 VNN3Q9NY84 501 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 PDP2Q9P2J9 529 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 SH3GLB1Q9Y371 365 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 SAMHD1Q9Y3Z3 626 aaKnown RBP16.97■□□□□ 0.31
VIM-201ENST00000224237 MYOCOSA0A1B0GUC4 107 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 DPPA5A6NC42 116 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 ADAMDEC1O15204 470 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 CDC123O75794 336 aaPredicted RBP16.97■□□□□ 0.31
VIM-201ENST00000224237 FESP07332 822 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 LYNP07948 512 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 CHRM4P08173 479 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 TNFRSF1BP20333 461 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 FPR1P21462 350 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 ALAS2P22557 587 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 XCR1P46094 333 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 OR1E2P47887 323 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 HSD17B7P56937 341 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 DAB2P98082 770 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 MGAT2Q10469 447 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 PPP1R8Q12972 351 aaKnown RBP16.97■□□□□ 0.31
VIM-201ENST00000224237 ZCCHC12Q6PEW1 402 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 ZNF574Q6ZN55 896 aaPredicted RBP16.97■□□□□ 0.31
VIM-201ENST00000224237 C16orf62Q7Z3J2 963 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 TMEM179BQ7Z7N9 219 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 CHERPQ8IWX8 916 aaKnown RBP16.97■□□□□ 0.31
VIM-201ENST00000224237 PROX1Q92786 737 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 NRBF2Q96F24 287 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 LOXL4Q96JB6 756 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 TRNT1Q96Q11 434 aaKnown RBP16.97■□□□□ 0.31
VIM-201ENST00000224237 ZNF300Q96RE9 604 aaPredicted RBP16.97■□□□□ 0.31
VIM-201ENST00000224237 ANKRD60Q9BZ19 345 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 ADAP2Q9NPF8 381 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 GIN1Q9NXP7 522 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 NDOR1Q9UHB4 597 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 CDC14AQ9UNH5 594 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 AGRPO00253 132 aa16.96■□□□□ 0.31
VIM-201ENST00000224237 ZNF749O43361 778 aa16.96■□□□□ 0.31
VIM-201ENST00000224237 H6PDO95479 791 aa16.96■□□□□ 0.31
VIM-201ENST00000224237 ATXN8OSP0DMR3 200 aa16.96■□□□□ 0.31
VIM-201ENST00000224237 DUSP3P51452 185 aaPredicted RBP16.96■□□□□ 0.31
VIM-201ENST00000224237 PROX2Q3B8N5 592 aa16.96■□□□□ 0.31
VIM-201ENST00000224237 HEPHL1Q6MZM0 1159 aa16.96■□□□□ 0.31
VIM-201ENST00000224237 CARM1Q86X55 608 aa16.96■□□□□ 0.31
VIM-201ENST00000224237 GALNT12Q8IXK2 581 aa16.96■□□□□ 0.31
VIM-201ENST00000224237 HS3ST5Q8IZT8 346 aa16.96■□□□□ 0.31
VIM-201ENST00000224237 VWA5B2Q8N398 1253 aa16.96■□□□□ 0.31
VIM-201ENST00000224237 SLC16A11Q8NCK7 471 aa16.96■□□□□ 0.31
VIM-201ENST00000224237 IFI44Q8TCB0 444 aa16.96■□□□□ 0.31
VIM-201ENST00000224237 SLC9A6Q92581 669 aa16.96■□□□□ 0.31
VIM-201ENST00000224237 RBM18Q96H35 190 aaKnown RBP16.96■□□□□ 0.31
VIM-201ENST00000224237 EPYCQ99645 322 aa16.96■□□□□ 0.31
VIM-201ENST00000224237 GABARAPL1Q9H0R8 117 aa16.96■□□□□ 0.31
VIM-201ENST00000224237 KCNE3Q9Y6H6 103 aa16.96■□□□□ 0.31
VIM-201ENST00000224237 MAU2Q9Y6X3 613 aa16.96■□□□□ 0.31
VIM-201ENST00000224237 EIF4E1BA6NMX2 242 aaKnown RBP16.95■□□□□ 0.3
VIM-201ENST00000224237 IFNW1P05000 195 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 CT62P0C5K7 136 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 UBTFL6P0CB48 400 aaPredicted RBP16.95■□□□□ 0.3
VIM-201ENST00000224237 RRM2P31350 389 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 KCNJ5P48544 419 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 HPCAP84074 193 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 ACY1Q03154 408 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 MAP4K2Q12851 820 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 EPS8Q12929 822 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 BIKQ13323 160 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 ERV3-1Q14264 604 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 CLPPQ16740 277 aaPredicted RBP16.95■□□□□ 0.3
VIM-201ENST00000224237 SLC36A3Q495N2 470 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 MED25Q71SY5 747 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 ARHGAP22Q7Z5H3 698 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 TSEN54Q7Z6J9 526 aaKnown RBP16.95■□□□□ 0.3
VIM-201ENST00000224237 CDRT4Q8N9R6 151 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 SIMC1Q8NDZ2 872 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 ZNF354BQ96LW1 612 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 OR1F2PQ96R84 312 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 SYNDIG1Q9H7V2 258 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 CXorf21Q9HAI6 301 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 C11orf16Q9NQ32 467 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 PCDHGB3Q9Y5G1 929 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 PCDHGA5Q9Y5G8 931 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 PRAMEF25A6NGN4 478 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 TGFBR3LH3BV60 316 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 DSCR3O14972 297 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 COQ9O75208 318 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 DNAJB5O75953 348 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 SNAP29O95721 258 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 THRBP10828 461 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 CYP27C1Q4G0S4 372 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 ZC3H14Q6PJT7 736 aaKnown RBP16.95■□□□□ 0.3
VIM-201ENST00000224237 UGT2A3Q6UWM9 527 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 WDR53Q7Z5U6 358 aaPredicted RBP16.95■□□□□ 0.3
VIM-201ENST00000224237 DHRSXQ8N5I4 330 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 GPR32P1Q8NGA4 272 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 APOBEC4Q8WW27 367 aaKnown RBP16.95■□□□□ 0.3
VIM-201ENST00000224237 RIT1Q92963 219 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 SLC35A4Q96G79 324 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 DGAT2Q96PD7 388 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms