RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 CCDC85BQ15834 202 aaPredicted RBP12.91□□□□□ -0.34
GABPB1-201ENST00000220429 ATP6AP1LQ52LC2 224 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 HAGHLQ6PII5 290 aaPredicted RBP12.91□□□□□ -0.34
GABPB1-201ENST00000220429 OR52E4Q8NGH9 312 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 MOSPD2Q8NHP6 518 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 ULK4Q96C45 1275 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 OTUB1Q96FW1 271 aaPredicted RBP12.91□□□□□ -0.34
GABPB1-201ENST00000220429 SARGQ9BW04 601 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 PPP1R3EQ9H7J1 279 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 DLL4Q9NR61 685 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 EIF2B4Q9UI10 523 aaKnown RBP12.91□□□□□ -0.34
GABPB1-201ENST00000220429 SCP2D1Q9UJQ7 156 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 POM121BA6NF01 834 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 CRCPO75575 148 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 CDRT1O95170 752 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 MAZP56270 477 aaKnown RBP12.9□□□□□ -0.34
GABPB1-201ENST00000220429 SPCS3P61009 180 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 RBMS2Q15434 407 aaKnown RBP12.9□□□□□ -0.34
GABPB1-201ENST00000220429 SEC23BQ15437 767 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 FAM74A1Q5RGS3 127 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 ZNF57Q68EA5 555 aaPredicted RBP12.9□□□□□ -0.34
GABPB1-201ENST00000220429 FAM198BQ6UWH4 519 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 FAM151BQ6UXP7 276 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 OTOP2Q7RTS6 562 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 SSX9Q7RTT3 188 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 STK40Q8N2I9 435 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 OR10A6Q8NH74 314 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 OR51J1Q9H342 316 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 ANKRA2Q9H9E1 313 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 SEC14L3Q9UDX4 400 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 PLEKHB1Q9UF11 243 aaPredicted RBP12.9□□□□□ -0.34
GABPB1-201ENST00000220429 ELOVL7A1L3X0 281 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 GRXCR2A6NFK2 248 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 FFAR3O14843 346 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 GPR42O15529 346 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 VEGFDO43915 354 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 VPS4BO75351 444 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 CREG1O75629 220 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 GLUD1P00367 558 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 PRR35P0CG20 571 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 APEHP13798 732 aaKnown RBP12.9□□□□□ -0.34
GABPB1-201ENST00000220429 SPI1P17947 270 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 LAG3P18627 525 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 POU3F2P20265 443 aaPredicted RBP12.9□□□□□ -0.34
GABPB1-201ENST00000220429 ACTR1BP42025 376 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 MRPL19P49406 292 aaKnown RBP12.9□□□□□ -0.34
GABPB1-201ENST00000220429 HTRA3P83110 453 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 LRRC32Q14392 662 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 RBBP7Q16576 425 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 ZNF628Q5EBL2 1059 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 OR2B11Q5JQS5 317 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 TMEM88Q6PEY1 159 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 BTN2A1Q7KYR7 527 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 ZDHHC21Q8IVQ6 265 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 HS6ST3Q8IZP7 471 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 DMBX1Q8NFW5 382 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 OR8J3Q8NGG0 315 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 NR4A3Q92570 626 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 BOCQ9BWV1 1114 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 C14orf105Q9NVL8 296 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 DHRS7Q9Y394 339 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 PRRC2BQ5JSZ5 2229 aaKnown RBP12.9□□□□□ -0.34
GABPB1-201ENST00000220429 PTPRSQ13332 1948 aa12.9□□□□□ -0.34
GABPB1-201ENST00000220429 SGK494L7N484 410 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 PER2O15055 1255 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 LILRB3O75022 631 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 ZNF821O75541 412 aaPredicted RBP12.9□□□□□ -0.35
GABPB1-201ENST00000220429 TOXO94900 526 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 MLYCDO95822 493 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 TRBC1P01850 177 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 CKMP06732 381 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 HIST1H2AGP0C0S8 130 aaPredicted RBP12.9□□□□□ -0.35
GABPB1-201ENST00000220429 HIST1H2ADP20671 130 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 PSMA1P25786 263 aaKnown RBP12.9□□□□□ -0.35
GABPB1-201ENST00000220429 SLC6A1P30531 599 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 LCN1P31025 176 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 XKP51811 444 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 MC2RQ01718 297 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 LMAN2Q12907 356 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 CAMK2GQ13555 558 aaPredicted RBP12.9□□□□□ -0.35
GABPB1-201ENST00000220429 PON3Q15166 354 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 P2RY14Q15391 338 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 SSX2Q16385 188 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 XKR7Q5GH72 579 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 C9orf152Q5JTZ5 239 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 HIST2H2AA3Q6FI13 130 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 ASPGQ86U10 573 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 SERPINA9Q86WD7 417 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 ZFP82Q8N141 532 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 PHOSPHO1Q8TCT1 267 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 OTULINQ96BN8 352 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 HIST1H2AHQ96KK5 128 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 GAS2L1Q99501 681 aaPredicted RBP12.9□□□□□ -0.35
GABPB1-201ENST00000220429 HIST1H2AJQ99878 128 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 CFAP97Q9P2B7 532 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 STUB1Q9UNE7 303 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 CLCA2Q9UQC9 943 aa12.9□□□□□ -0.35
GABPB1-201ENST00000220429 DENND4AQ7Z401 1863 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 MEIKINA0A087WXM9 373 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 TEX13CA0A0J9YWL9 993 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms