RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Gm21915J3QPM7 133 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Btbd35f8J3QQ50 498 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Btbd35f17L7MU81 498 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Btbd35f18L7MU83 498 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 EmdO08579 259 aaKnown RBP6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 FkbplO35450 347 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Mtnd5P03921 607 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Epha4Q03137 986 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 BcheQ03311 603 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Hoxc4Q08624 264 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Btbd35f14Q1LZI5 498 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Trim40Q3UWA4 246 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Chsy3Q5DTK1 884 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Btbd35f27Q5FWA1 498 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 ZpbpQ62522 350 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ly6eQ64253 130 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 BC061212Q6P8K3 481 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Fbxw13Q8BI57 466 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Stfa2l1Q8BWM3 103 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Sall4Q8BX22 1067 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ppwd1Q8CEC6 646 aaKnown RBP6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Rln3Q8CHK2 141 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Rfwd3Q8CIK8 774 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Samd14Q8K070 417 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Mmp21Q8K3F2 568 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Sdr9c7Q8K3P0 313 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Tnfaip8Q921Z5 198 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Eif2b1Q99LC8 305 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 GMCL1P1Q99N64 498 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Nxnl2Q9D531 156 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Prkar1aQ9DBC7 381 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Pla2g12aQ9EPR2 192 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Aldh6a1Q9EQ20 535 aaKnown RBP6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Spag4Q9JJF2 443 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Upk3aQ9JKX8 287 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 HaspinQ9Z0R0 754 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm28363A0A087WQW2 129 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Kctd14A0A0U1RNG7 287 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Mamdc4A2AJA7 1228 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 SrsxB2RZI1 361 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 TmppeD3Z286 447 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ms4a7E9Q9V5 267 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 4933402N22RikF7D1B3 190 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm8926L7MUE8 181 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Clk3O35492 638 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Emp3O35912 163 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Zfp60P16374 707 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Fosl1P48755 273 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Epb42P49222 691 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ruvbl1P60122 456 aaKnown RBP6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Tfb2mQ3TL26 396 aaKnown RBP6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm5416Q6IE28 97 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Cdh24Q6PFX6 781 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Mtch2Q791V5 303 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Adgrd1Q80T32 903 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Klhl13Q80TF4 654 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ckap4Q8BMK4 575 aaKnown RBP6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Znf574Q8BY46 900 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Serpina11Q8CIE0 424 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Olfr1512Q8VF72 313 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Klk6Q91Y82 253 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Egln2Q91YE2 419 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Nt5c1bQ91YE9 573 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Taldo1Q93092 337 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Tmem186Q9CR76 216 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Hspa12bQ9CZJ2 685 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Rsph14Q9D3W1 341 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Bbs10Q9DBI2 713 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Plscr2Q9DCW2 307 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Slco1a4Q9EP96 670 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Rcan2Q9JHG2 197 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Spry4Q9WTP2 300 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 PrkraQ9WTX2 313 aaKnown RBP6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Mbd2Q9Z2E1 414 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ifi213D3Z5G0 586 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm5799E9Q2M1 201 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Olfr618K7N6B3 318 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 CcnkO88874 554 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Cpa3P15089 417 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Impdh1P50096 514 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Polr1cP52432 346 aaKnown RBP6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Fbxo7Q3U7U3 523 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gal3st4Q3V1B8 480 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Slc9b2Q5BKR2 547 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Zfp324Q78F42 583 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Olfr871Q7TRF0 311 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Akr7a2Q8CG76 367 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Eif3lQ8QZY1 564 aaKnown RBP6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Mapre2Q8R001 326 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 OlahQ8R197 265 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Micu1Q8VCX5 477 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Olfr666Q8VH00 318 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Nkain1Q9D035 207 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ift46Q9DB07 301 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Vmn1r40Q9EQ46 310 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Znf207Q9JMD0 495 aaKnown RBP6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Actl7bQ9QY83 418 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Hspb3Q9QZ57 154 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 FryE9Q8I9 3020 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ssxb8B1AY40 170 aa6.51□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms