RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Gm5938A2AEN9 163 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Zfp54E9PW05 585 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Gml2G5E8L7 176 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 TspearJ3S6Y1 670 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Btnl2O70355 454 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Itga5P11688 1053 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 PahP16331 453 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Olfr1136Q0VBI4 310 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Dmrtc1bQ2PMX6 267 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Q3UY34 256 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 ClpbQ60649 677 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 CstbQ62426 98 aaKnown RBP9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Tas2r3Q7TQA7 316 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Olfr1101Q7TR59 310 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Ly6g5cQ8K1T5 149 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Slco3a1Q8R3L5 710 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Tmem5Q8VDX6 444 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Olfr1093Q8VF14 322 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Olfr535Q8VGL3 312 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Scgb3a1Q920D7 104 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 MmabQ9D273 237 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Slc39a1Q9QZ03 324 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Znf318Q99PP2 2237 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Col1a1P11087 1453 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Zfp808B8JJZ4 753 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Nxpe3B9EKK6 559 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Aldh3b2E9Q3E1 479 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Olfr420E9Q4G0 321 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Vmn2r12L7N217 831 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Ring1O35730 406 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 NlkO54949 527 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Kcnc1P15388 511 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Cd48P18181 240 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Grik2P39087 908 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Mmp11Q02853 492 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Slc37a3Q3TIT8 494 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Sec24aQ3U2P1 1090 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Wdr20Q3UWE6 569 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Olfr857Q7TRF7 309 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Mal2Q8BI08 175 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Aifm2Q8BUE4 373 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Irak2Q8CFA1 622 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Olfr850Q8VFF2 315 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Olfr985Q8VGB4 311 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 AassQ99K67 926 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Tktl1Q99MX0 595 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Metap1dQ9CPW9 335 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Arv1Q9D0U9 266 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Gm7233E9PZI8 198 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Gm9732F6QVC4 198 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Gm6619F6URP1 175 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Gm8104K7N744 198 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 C9P06683 548 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Tyrp1P07147 537 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Csf3rP40223 837 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Kcnj13P86046 360 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Xrra1Q3U3V8 786 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Stox2Q499E5 926 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 OclnQ61146 521 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Olfr290Q7TS13 315 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Mbtps2Q8CHX6 515 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Olfr352Q8VGJ9 315 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Mettl18Q9CZ09 362 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Exosc7Q9D0M0 291 aaKnown RBP9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Q9D112 206 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Tssk4Q9D411 328 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 GatmQ9D964 423 aaKnown RBP9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Cul9Q80TT8 1865 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Hmgb3O54879 200 aaKnown RBP9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Hoxc13P50207 328 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 DmpkP54265 631 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 SctrQ5FWI2 447 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Zfp866Q6PGD2 520 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Olfr1161Q7TR29 321 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Sec24bQ80ZX0 1251 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Smco3Q8BQM7 225 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Hs3st5Q8BSL4 346 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Pamr1Q8BU25 720 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Gtf2f2Q8R0A0 249 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Pla2g15Q8VEB4 412 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Olfr516Q8VFZ5 314 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Herpud2Q9JJC9 404 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Psma1Q9R1P4 263 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Ramp2Q9WUP0 189 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 NinQ61043 2035 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 NalcnQ8BXR5 1738 aa9.4□□□□□ -0.9
Syne1-201ENSMUST00000041639 Ttc39aA2ACP1 578 aa9.4□□□□□ -0.91
Syne1-201ENSMUST00000041639 Gpr155A2AWR3 868 aa9.4□□□□□ -0.91
Syne1-201ENSMUST00000041639 CntfP51642 198 aa9.4□□□□□ -0.91
Syne1-201ENSMUST00000041639 UbdP63072 162 aa9.4□□□□□ -0.91
Syne1-201ENSMUST00000041639 Gas1Q01721 343 aa9.4□□□□□ -0.91
Syne1-201ENSMUST00000041639 Sh3bp2Q06649 559 aa9.4□□□□□ -0.91
Syne1-201ENSMUST00000041639 Zfp658Q5PPQ4 887 aa9.4□□□□□ -0.91
Syne1-201ENSMUST00000041639 Npr2Q6VVW5 1047 aa9.4□□□□□ -0.91
Syne1-201ENSMUST00000041639 Pced1bQ8BGX1 433 aaKnown RBP9.4□□□□□ -0.91
Syne1-201ENSMUST00000041639 Mrps23Q8VE22 177 aaKnown RBP9.4□□□□□ -0.91
Syne1-201ENSMUST00000041639 Usb1Q91W78 267 aa9.4□□□□□ -0.91
Syne1-201ENSMUST00000041639 Mcoln1Q99J21 580 aa9.4□□□□□ -0.91
Syne1-201ENSMUST00000041639 Tdp2Q9JJX7 370 aa9.4□□□□□ -0.91
Syne1-201ENSMUST00000041639 Lrrc31F6VYM1 502 aa9.4□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 26.2 ms