RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Nxpe2Q3U095 558 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Mtmr11Q3V1L6 700 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Abcg1Q64343 666 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 N4bp1Q6A037 893 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 WdcpQ6NV72 663 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 CenpiQ8K1K4 746 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr686Q8VGX3 317 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr561Q8VGZ6 314 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Dhrs7Q9CXR1 338 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Rnf186Q9D241 226 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Popdc3Q9ES81 291 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Yipf7Q9JIM5 254 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Col11a2Q64739 1736 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Vmn2r105E9Q3A5 860 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm17728E9Q5K2 132 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 5830473C10RikF8VQ07 620 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Rplp0P14869 317 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 PpibP24369 216 aaKnown RBP9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Tnfrsf4P47741 272 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 GlaP51569 419 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 BC080695Q66JY9 481 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Slc34a3Q80SU6 601 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Slc36a3Q811P0 477 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Prox2Q8BII1 593 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Flrt2Q8BLU0 660 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Leng9Q8BTN6 485 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Q8C3W1 322 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Tmem106aQ8VC04 261 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr535Q8VGL3 312 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Pcdhga12Q91XY7 932 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Uqcc2Q9CQY6 136 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Tspan11Q9D1D1 253 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Sec23bQ9D662 767 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Bco1Q9JJS6 566 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Cyp4a30bA0A087WS15 508 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Slc23a4A0A0J9YUX7 615 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Spaca5A2AE20 160 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gpr155A2AWR3 868 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Nxpe3B9EKK6 559 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Mtx2O88441 263 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Cfl1P18760 166 aaKnown RBP9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ap1g1P22892 822 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Klf1P46099 358 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Fbxw18Q3TSA9 469 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ctu2Q3U308 514 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Klhl21Q3U410 597 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 4930438A08RikQ5SPH3 536 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 RgmaQ6PCX7 454 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Oxa1lQ8BGA9 433 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Eif4e2Q8BMB3 245 aaKnown RBP9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Chpt1Q8C025 398 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Yod1Q8CB27 343 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Fam149aQ8CFV2 787 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Blzf1Q8R2X8 403 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 TapbplQ8VD31 451 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr771Q8VFH6 317 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Mthfd1Q922D8 935 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Prl8a6Q9DAY2 240 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Rgs17Q9QZB0 210 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Scnn1gQ9WU39 655 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Xpr1Q9Z0U0 695 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Igkv5-43A0A0B4J1J2 115 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr592E9PYB3 312 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Xkr6E9Q6C8 638 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm6619F6URP1 175 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm16434J3QN10 205 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Vmn2r13L7N1X2 831 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Vmn2r12L7N217 831 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 4930555G01RikL7N253 205 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 F9P16294 471 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Capza1P47753 286 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Hexim2Q3TVI4 313 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Spag8Q3V0Q6 470 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 RhbgQ8BUX5 455 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 ExogQ8C163 368 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Tmem125Q8CHQ6 216 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 SgtbQ8VD33 304 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr1387Q8VFA9 311 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Vmn1r71Q8VIC0 307 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr459Q924H8 314 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Rpl34Q9D1R9 117 aaKnown RBP9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Dapl1Q9D757 107 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Cdk20Q9JHU3 346 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Slc6a14Q9JMA9 638 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Spats1A2RRY8 269 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Prss56F2YMG0 604 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 RfngO09009 332 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ctla2bP12400 113 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Etv4P28322 485 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Fezf1Q0VDQ9 475 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 March5Q3KNM2 278 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ccm2lQ8VCC6 481 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Med9Q8VCS6 142 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr689Q8VG18 320 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr53Q8VGL8 312 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Tram2Q924Z5 370 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Wdr6Q99ME2 1125 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Atg12Q9CQY1 141 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Cst11Q9D269 139 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Acad8Q9D7B6 413 aa9.81□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms